Pairwise Alignments

Query, 422 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 517 a.a., Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain from Pseudomonas stutzeri RCH2

 Score =  121 bits (303), Expect = 6e-32
 Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 105/486 (21%)

Query: 7   HGGCHQIGKSCVEINTKKS-KILIDCGM----DPSDNGLPDINDSDVD-------AVVVS 54
           HG    +  SC +++   S  +L+DCG+    + S +G       D++       A+VV+
Sbjct: 9   HGAKDGVTGSCHQLHMDASHSLLVDCGLFQGNETSSDGRAATGRLDIEFSLRTVQALVVT 68

Query: 55  HAHLDHCGAIPYF---NFK-KIFCNPPTADLMYNVWKDTVSLSKTYKEEDIKKSMDVI-- 108
           H H+DH G IPY     +K  I+C+ P+A L+  V +D   L  +  ++ +++ + ++  
Sbjct: 69  HVHIDHVGRIPYLLAAGYKGPIYCSEPSAKLLPIVLEDAFKLGFSRDQKAVERYLKLVEQ 128

Query: 109 --KTVNYREEKQV--TSDI--KMKMYDAGHILGSSSLYLDI------DGKKLLYTGDINE 156
             + + Y+    +  T ++  ++++  AGHILGS+ + +D+      + ++++++GD+  
Sbjct: 129 RLRPLPYQRWSTLLETEELIARVRLQRAGHILGSAYVEIDLTYPTSGESQRIVFSGDLGA 188

Query: 157 IETRTLRAADTDFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIDNGGKVIIPV 216
                L   ++  +  D +++ESTYG  L     R    ++L   I   + + G V+IP 
Sbjct: 189 AHAPLLMPPESP-ERADILVLESTYGDRLH--EDRTSRRQRLEAVIEHALQDQGTVLIPA 245

Query: 217 FAVGRSQ-------EII------------------------------------------V 227
           F++GR+Q       EII                                          V
Sbjct: 246 FSIGRTQELLYELEEIIHSKQQVSTDQSSLPADERARGGIESAGAPHSHSPLSSEERARV 305

Query: 228 VINNYMKSGALK----EVPIYINGSL-THTTGMYMGYSDWLNPKIKNAIENRINP--FGN 280
             N+    G L+     +PI ++  L T  T  Y     + N + +  +E   NP  F N
Sbjct: 306 ERNSDNAHGQLETDWPRLPIILDSPLATRFTEAYRSLQPYWNQEARERVEGGRNPLAFDN 365

Query: 281 LI---KGGDEVF-------SREPCIIISTSGMVQGGPVLQYL-SLLKNPRNKIILTGYQA 329
           LI      D +        +  P I+I+ +GM  GG ++ YL ++L +PR+ ++  GYQA
Sbjct: 366 LIMIDSHADHIAVVNHLTQTARPAIVIAGNGMCSGGRIVNYLKAMLHDPRHDVLFVGYQA 425

Query: 330 EGTIGRSLEEGATE---VKPFKRAIPVNGKVVKI-EFSAHADYNSLLRFMKKIPQ-PDKA 384
           +GT G+++++   +   V        +  +V  I  +SAHAD   L+ F+  + + P K 
Sbjct: 426 QGTPGQAIQQYGPKGGYVDLDGERFDIRARVTSIGGYSAHADQKGLVEFVTGMREWPTKI 485

Query: 385 IVMHGE 390
            V+HGE
Sbjct: 486 GVVHGE 491