Pairwise Alignments

Query, 422 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 337 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Phaeobacter inhibens DSM 17395

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 30/202 (14%)

Query: 48  VDAVVVSHAHLDHCGAIPYFNFKKIFCNPPTADLMYNVWKDTVSLSKTYKEEDIKKSMDV 107
           V   +++H H DH  A        ++ +P T D+M                  I+   D 
Sbjct: 33  VPRAMITHGHADHARA----GHGTVWASPQTLDIMA-----------------IRYGEDF 71

Query: 108 IKTVNYREEKQVTSDIKMKMYDAGHILGSSSLYLDIDGKKLLYTGDINEIETRTLRAADT 167
             T    E       I ++   AGH+LGS  + +D +   +  +GD   ++      A  
Sbjct: 72  CATRIAVEGSTEVDGIGVRFTPAGHVLGSCQITVDDNSTAITVSGDYARVDNPA--CASF 129

Query: 168 DFDEIDTIIIESTYGSPLDIKPARKVLEKQLIDEISETIDNGGKVIIPVFAVGRSQEIIV 227
                D  + E+T+G P+   P      ++L+  ++   +     ++  +A+G++Q +I 
Sbjct: 130 QLAPCDVFVTEATFGLPVFNHPTPHSEIEKLLRSVAAQPERCH--LVGAYALGKAQRVIA 187

Query: 228 VINNYMKSGALKEVPIYINGSL 249
           ++       A  + PIYI+G+L
Sbjct: 188 LLRQ-----AGWDQPIYIHGAL 204