Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 210 a.a., Ribonuclease HII (EC 3.1.26.4) from Pseudomonas fluorescens FW300-N2E2

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 26/181 (14%)

Query: 20  EKIIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELYIIINEM 79
           E+++ G+DE GRGP+ G +V A+V +D K       L L DSK+L++ +RE+LY   +E+
Sbjct: 12  EELVAGVDEVGRGPLCGAVVTAAVILDPKRPI----LGLNDSKKLTEARREKLY---DEI 64

Query: 80  CDVEKIVIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSN 139
           C+            ++++ +N+    + A  +             ++I    + + +  +
Sbjct: 65  CEKALSWCIARAEVEEIDELNILHATMLAMQRAVQ---------GLHI----TPKLAMID 111

Query: 140 QFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG----SGYP 195
             +   ++   E + +   D     ++AASI+AKV+RDR +  ++  +   G     GYP
Sbjct: 112 GNRCPKLSMRAEAVIQ--GDAKVPAIAAASILAKVSRDREMAAFELIYPGYGIGGHKGYP 169

Query: 196 S 196
           +
Sbjct: 170 T 170