Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 206 a.a., ribonuclease HII from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 28/180 (15%)

Query: 22  IIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELYIIINEMCD 81
           +I G+DE GRGP++G +V A+V +D         + L DSK+LS+KKR  L+  I     
Sbjct: 20  LIAGVDEVGRGPLVGDVVTAAVILDPNRPI----MGLNDSKKLSEKKRLALFPEIQVKAL 75

Query: 82  VEKI-VIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSNQ 140
              +    P+ ID+    +N+ +  + A  +       + D   + ID            
Sbjct: 76  AWAVGRCSPQEIDE----LNIFQATMVAMQRAVAGLRIQPD--LVLIDG----------- 118

Query: 141 FKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG----SGYPS 196
              K+    +E  A  K D     +SAASIIAKV RD+ +E   + + + G     GYP+
Sbjct: 119 --NKIPKLPMEAQAVVKGDLRVAQISAASIIAKVIRDQEMEALDKQYPQFGFAKHKGYPT 176