Pairwise Alignments

Query, 242 a.a., ribonuclease HII from Methanococcus maripaludis S2

Subject, 209 a.a., ribonuclease HII (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.9 bits (141), Expect = 8e-14
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 33/216 (15%)

Query: 22  IIVGLDEAGRGPVLGPMVIASVKIDEKNLYKLNDLELKDSKQLSKKKREELYIIINEMCD 81
           ++ G+DE GRGP++G +V A+V +D         L L DSK+L++K+RE L+   +E+C 
Sbjct: 19  LVAGVDEVGRGPLVGDVVTAAVILDPNRPI----LGLNDSKKLTEKRREALF---DEIC- 70

Query: 82  VEKIVIDPETIDKQMEIINLNKIELSAFSKLSNHFIRENDNISIYIDACSSSEQSFSNQF 141
            EK +          EI  LN +  +  +        +     + +D   +   +F++Q 
Sbjct: 71  -EKALSFHVGRASPAEIDELNILHATMLAMQRAVSGLKLTPALVLVD--GNRSPAFTHQG 127

Query: 142 KAKLINKNVEIIAEH---KADENYKIVSAASIIAKVTRDRVIEEYKETFGEIG----SGY 194
            +         +A H   K D     +SAASIIAKVTRDR ++     + + G     GY
Sbjct: 128 LS---------LASHSIIKGDGLIASISAASIIAKVTRDREMDALDAAYPQYGFAKHKGY 178

Query: 195 PSDPKTKKFLKNYVYENRTLPKIARKSWATSKNLLK 230
           P+    +   ++ V++        RKS+   K LL+
Sbjct: 179 PTKAHFEAIAEHGVFDQ------YRKSFKPVKALLE 208