Pairwise Alignments

Query, 727 a.a., elongation factor EF-2 from Methanococcus maripaludis S2

Subject, 692 a.a., Translation elongation factor G (NCBI) from Rhodospirillum rubrum S1H

 Score =  189 bits (480), Expect = 4e-52
 Identities = 131/467 (28%), Positives = 221/467 (47%), Gaps = 51/467 (10%)

Query: 248 VLDMSIKHLPNPLTAQKYRIPNIWKGDAESTIGKSMVACDPNGPLAGVVTKIIVDKHAGA 307
           +LD  +  LP+PL      +P I  G    T    +  C  + P + +  KI+ D   G+
Sbjct: 271 MLDAVVDFLPSPLD-----VPAI-HGLIPETHEDVIRGCSDDEPFSALAFKIMNDPFVGS 324

Query: 308 ISACRLFSGRIKQGDDLYLVGSKQKARAQQVSIFMGAERVQVPSISAGNICALTGLREAT 367
           ++  R++SG ++ G  +      ++ R  ++ +     R ++    AG+I A+ GL++ T
Sbjct: 325 LTFARVYSGTVESGSYVQNTVKDKRERIGRMLLMHANNREEIKWAGAGDIVAIVGLKDTT 384

Query: 368 AGETVCSPSEILEPGFESLSHTSEPVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEI 427
            G+T+   S+ ++P         EPVI VA+E K   D+ K+   L ++A ED + RV  
Sbjct: 385 TGDTL---SDTIKPVILERMEFPEPVIEVAVEPKTKADVEKMGMALARLAAEDPSFRVAS 441

Query: 428 NEETGEHLISGMGELHIEVITNTKIGRDGGIEVDVGEPIVVYRETIMGTSPEIEGKSPNK 487
           + E+G+ +I GMGELH+E++ + ++ R+  +E  VG P V YRETI              
Sbjct: 442 DSESGQTVIKGMGELHLEILVD-RMKREFKVECSVGAPQVAYRETI-------------- 486

Query: 488 HNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVMSIYNG 547
                                 K+   DY  K  + G  +  +  +              
Sbjct: 487 ---------------------SKVFTVDYVHKKQSGGSGQFAKVSITFSPLPPGSGYQFE 525

Query: 548 NMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPA 607
           + IV    G V   E    + +G K  +  G +A   V  +K  L+D  +H+  +     
Sbjct: 526 SKIVG---GSVP-KEYIPGVEKGLKSAIDTGVIAGFPVTDMKASLIDGGYHD--VDSSVL 579

Query: 608 QIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQILDMEQEGDM 667
               A R   R+ + +A P LLEP+  V + TP+DYMGD + ++N+RRG IL M+Q G+ 
Sbjct: 580 AFEIAARAAFREGLPKAGPKLLEPIMKVEVVTPEDYMGDVIGDLNSRRGNILGMDQRGNA 639

Query: 668 SIIKSSVPVAEMFGFAGAIRGATQGRCLWSVEFSGFERVPNELQPKI 714
            +I + VP+A MFG+   +R  +QGR  +++ F  +  VPN +  +I
Sbjct: 640 RVIGAMVPLANMFGYVNTLRSMSQGRAQYTMHFDHYSEVPNNVSEEI 686



 Score =  110 bits (274), Expect = 3e-28
 Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 6/137 (4%)

Query: 19  EQIRNMGICAHIDHGKTTLSDNLLAGAGMISK--ELAGDQLALDFDEEEAARGITIYAAN 76
           ++ RN+GI AHID GKTT ++ +L   G   K  E+      +D+ E+E  RGITI +A 
Sbjct: 8   DRYRNIGIMAHIDAGKTTTTERILCYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAA 67

Query: 77  VSMVHEYSGKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQA 136
            +       +E  +N+IDTPGHVDF  +V R++R +DGA+ V  +V GV PQ+ETV RQA
Sbjct: 68  TTAFW----RENRVNIIDTPGHVDFTIEVERSLRVLDGAIAVFDSVAGVEPQSETVWRQA 123

Query: 137 LKEKVKPVLFINKVDRL 153
            K KV  + F+NK+DR+
Sbjct: 124 DKYKVPRMCFVNKMDRI 140



 Score = 26.2 bits (56), Expect = 0.006
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 11/74 (14%)

Query: 479 EIEGKSPNKHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQA 538
           E   K+     KL   A  M+++   AY+EG   DE+  KK    G             A
Sbjct: 203 EYAEKAAEYREKLLETAVEMDDAAMEAYLEGVEPDEETLKKCIRKGTI-----------A 251

Query: 539 KKVMSIYNGNMIVN 552
            K + + NG+   N
Sbjct: 252 MKFVPVLNGSSFKN 265