Pairwise Alignments

Query, 386 a.a., DNA-directed RNA polymerase subunit A'' from Methanococcus maripaludis S2

Subject, 386 a.a., DNA-directed RNA polymerase subunit A'' from Methanococcus maripaludis JJ

 Score =  743 bits (1918), Expect = 0.0
 Identities = 384/386 (99%), Positives = 386/386 (100%)

Query: 1   MQMADLEKKLENSVLPPLLKRELSEKILREEISEEYLVDEIISETTRAYERTLVEPGEAV 60
           MQMADLEKKLENSVLPPLLKRELSEKILREEISEEYLVDEII+ETTRAYERTLVEPGEAV
Sbjct: 1   MQMADLEKKLENSVLPPLLKRELSEKILREEISEEYLVDEIINETTRAYERTLVEPGEAV 60

Query: 61  GVVAAQSIGEPGTQMTMRTFHYAGVAELNVTLGLPRMIEIVDARKEPSTPTMTIYLNDEF 120
           GVVAAQSIGEPGTQMTMRTFHYAGVAELNVTLGLPRMIEIVDARKEPSTPTMTIYLNDEF
Sbjct: 61  GVVAAQSIGEPGTQMTMRTFHYAGVAELNVTLGLPRMIEIVDARKEPSTPTMTIYLNDEF 120

Query: 121 KGNREKAATVAKNIESTNVESVSEDISVDLVNECITIILNNQQLESRGLTVPDVIDAIKS 180
           KG+REKAATVAKNIESTNVESVSEDISVDLVNECITIILNNQQLESRGLTVPDVIDAIKS
Sbjct: 121 KGDREKAATVAKNIESTNVESVSEDISVDLVNECITIILNNQQLESRGLTVPDVIDAIKS 180

Query: 181 KMKLKIEDHENVLNLKIKTPSLKALRKRLPKVRAIHLKGVQNIKRVIIRKEVDEYILYSE 240
           KMKLKIEDHENVLNLKIKTPSLKALRKRLPKVRAIHLKGVQNIKRVIIRKEVDEYILYSE
Sbjct: 181 KMKLKIEDHENVLNLKIKTPSLKALRKRLPKVRAIHLKGVQNIKRVIIRKEVDEYILYSE 240

Query: 241 GSNIKEVFDIEGVDTTKTTTNNIVEIQDVLGIEAARNAIIYEMDATLGNQGLTVDKRHLM 300
           GSNIKEVFDIEGVDTTKTTTNNIVEIQDVLGIEAARNAIIYEMDATLGNQGLTVDKRHLM
Sbjct: 241 GSNIKEVFDIEGVDTTKTTTNNIVEIQDVLGIEAARNAIIYEMDATLGNQGLTVDKRHLM 300

Query: 301 MVADLMCTDGVVKPIGRHGIGGEKASVLARAAFEETVKHLYSASMRGYVDELGGVVENII 360
           MVADLMCTDGVVKPIGRHGIGGEKASVLARAAFEETVKHLYSASMRGYVDELGGVVENII
Sbjct: 301 MVADLMCTDGVVKPIGRHGIGGEKASVLARAAFEETVKHLYSASMRGYVDELGGVVENII 360

Query: 361 VGKPISMGTGCIDICIDKSYEEGKEL 386
           VGKPISMGTGCIDICIDKSYEEGKEL
Sbjct: 361 VGKPISMGTGCIDICIDKSYEEGKEL 386