Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 390 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  305 bits (782), Expect = 1e-87
 Identities = 164/387 (42%), Positives = 235/387 (60%), Gaps = 25/387 (6%)

Query: 1   LKTVHEINEKIRNGDAVVVTAEEMIDIVDELGAEKAAVEIDVVTTGTFGAMCSSGAFLNF 60
           ++T+ EINEKI+ G AVV TA E+     ELG    A ++DV+TTGTF  M +SGA LN 
Sbjct: 1   MRTIAEINEKIQAGRAVVWTATEVKARAPELGIAAIAQQVDVITTGTFEPMEASGAILNL 60

Query: 61  GHSDPPIKMCKTYLNGVEAYSGIAAVDAYLGATQTNSDDDIDISYGGSHVLEDLVAGKEI 120
           G +DPPIK+ + +LN V AYSG  A D  LGA++ + D + +  YGG  V+ DL+AG+++
Sbjct: 61  GQTDPPIKIRQCWLNDVRAYSGFGAADLLLGASEESEDPEAE--YGGGQVIADLIAGQKV 118

Query: 121 ELVAEGYTTDCYPRKKVETTITIDDLNQAILVNPRNCYQSYNGATNSTEEKIYTYMGALL 180
            L A G  TDCYPR+  ETTI  D +NQ  L NPRN YQ++    N  +E +YTY+G LL
Sbjct: 119 RLRAIGQGTDCYPRRSFETTIDRDSINQFYLFNPRNLYQNFIVGVNGGDETLYTYLGPLL 178

Query: 181 PEFGNLNYSGAGQLNPLQNDFNKETKTYNTLGMGTRIFLGGAQGYIAGSGTQH------- 233
           P  GN  Y+  G + PL ND         ++G+GTRIFLGG  GYIA  GTQH       
Sbjct: 179 PNLGNAVYANPGAIAPLFND-----PDLVSIGIGTRIFLGGGVGYIAWEGTQHFPLQKRL 233

Query: 234 ---SPNGGFGTLMVQGDLKEMSTKYLRGATIPKYGSTLYMGIGIPIPVLNAEIAKTCAIK 290
              +P G   TL + GD K+M   ++RG     YG++L +G+GIP+ V    +   CA+ 
Sbjct: 234 PNRTPVGPAATLALIGDAKQMLPDWVRGCYFQNYGASLMLGVGIPLAVTTEAVVAACAVT 293

Query: 291 DEDIAIPILDYGIPRRDKPELGVTNYKDARSGKVTIEVEIEGKKVDKCMRSASVSSYKVS 350
           D+ I  P++D+ IPRR +P  G+ +Y   +SG +     +EG+++    R+A ++S   S
Sbjct: 294 DDQIVAPVVDFSIPRRVRPTFGLVSYAKLKSGSIM----LEGQRI----RTAPLASLYRS 345

Query: 351 REISKELKNWISNSEFMLTQRLEPLKS 377
           +++++ LK WI   EF+LT+ +  L S
Sbjct: 346 QQVAELLKQWIEAGEFLLTEPVASLPS 372