Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 139 a.a., CBS domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 7e-12
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 15/130 (11%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDE-NGKLSGIITSWD-IAKAMAQD 447
           V DI++   V  S   +   A  ++    + HLP++ E +G L GI+T    I+  M   
Sbjct: 3   VSDIMTTDTVCISDQATTKDAHLLMSSRGVRHLPVISEADGTLVGILTHKKMISTVMGML 62

Query: 448 KH-------------SISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLG 494
            H             S++EIM       T DE + +       N +  LPVVD N+KV+G
Sbjct: 63  THYGNEGLDRQERRTSVAEIMDREFQRVTLDEPLAVVVDYFIDNKLGCLPVVDDNHKVIG 122

Query: 495 VVSAEDISKL 504
           ++++ D  KL
Sbjct: 123 ILTSSDFVKL 132



 Score = 35.8 bits (81), Expect = 9e-07
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMA 445
           V +I+ R     +L+  +       I+N +  LP+VD+N K+ GI+TS D  K  A
Sbjct: 79  VAEIMDREFQRVTLDEPLAVVVDYFIDNKLGCLPVVDDNHKVIGILTSSDFVKLCA 134