Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 1104 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 42.7 bits (99), Expect = 7e-08
 Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWD----IAKAMA 445
           V  ++S PV     + S+  A  +L E  I HL +  E G+  G+++  D    +  A  
Sbjct: 69  VDQVMSSPVYTADSHMSVHHAYHLLAEKGIRHLLVTGEAGQPVGVVSESDFRFHLGAAFF 128

Query: 446 QDKHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKLI 505
           +    ++ +M + +    P +T+  A   MS +++  + V ++  + LG+++  D  +  
Sbjct: 129 RRLRDVNAVMQSGVQLLQPGDTVRQALALMSASSLRCVVVAEA-GRPLGILTERDALRFF 187

Query: 506 GR 507
            R
Sbjct: 188 RR 189



 Score = 34.3 bits (77), Expect = 2e-05
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 424 IVDENGKLSGIITSWDIAKAMAQDKHSISE----IMTTYIVSATPDETIDMAARKMSRNN 479
           +V E G+  GI+T  D  +   +   S+ +    +M+  + S      +  A  +M   +
Sbjct: 167 VVAEAGRPLGILTERDALRFFRRGADSLEQPLAAVMSAPVASIPEGYPLSQAVDRMQAEH 226

Query: 480 ISGLPVVDSNNKVLGVVSAEDI 501
           +  L VV +  +V+GVVS  DI
Sbjct: 227 VRHLVVVGAAGEVVGVVSEHDI 248



 Score = 25.8 bits (55), Expect = 0.009
 Identities = 12/55 (21%), Positives = 27/55 (49%)

Query: 393 ILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQD 447
           ++S PV        ++QA   +   ++ HL +V   G++ G+++  DI   +  +
Sbjct: 201 VMSAPVASIPEGYPLSQAVDRMQAEHVRHLVVVGAAGEVVGVVSEHDIVSQLESE 255