Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 143 a.a., acetoin utilization protein AcuB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 33/127 (25%), Positives = 70/127 (55%), Gaps = 16/127 (12%)

Query: 389 LVKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQD- 447
           ++ DI+   VV   ++  +T A  +  + N +HL ++DE  KL G+++  D+ +A++ + 
Sbjct: 4   IIADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDEY-KLEGVLSERDLLRAISPNL 62

Query: 448 -------------KHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLG 494
                        +  I ++MT   V+  P  ++D+A+R +  +NI  LPV++ N  ++G
Sbjct: 63  GNGAETSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLE-NGDLVG 121

Query: 495 VVSAEDI 501
           +V+ +D+
Sbjct: 122 IVTWKDL 128



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 381 KPMKAKMKLVKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDI 440
           K ++   K +  +++R  V  +   S+  ASR L+E+NI  LP++ ENG L GI+T  D+
Sbjct: 70  KDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVL-ENGDLVGIVTWKDL 128

Query: 441 AKA 443
            +A
Sbjct: 129 LRA 131