Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 172 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 15/130 (11%)

Query: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDE-NGKLSGIITSWDIAKAM---- 444
           V DI+S  V+  S   S+  A  ++    + HLP++ E +G L G++T   +  ++    
Sbjct: 34  VSDIMSTEVICISDGASLKDAHHLMQTRGVRHLPVISETDGALVGVLTHKKMIASVLSML 93

Query: 445 ------AQDKHS----ISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLG 494
                 A D+      I+ +M     S TP+E +         N +  LPVVD+N KVLG
Sbjct: 94  NKYGQGALDRKERYTPIATVMDKDCQSLTPNEPLSTVVEYFIDNKLGCLPVVDNNKKVLG 153

Query: 495 VVSAEDISKL 504
           +V++ D  KL
Sbjct: 154 IVTSSDFIKL 163