Pairwise Alignments

Query, 513 a.a., homocysteine biosynthesis protein from Methanococcus maripaludis S2

Subject, 390 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  365 bits (938), Expect = e-105
 Identities = 202/399 (50%), Positives = 256/399 (64%), Gaps = 38/399 (9%)

Query: 2   KTVHEINEKIRNGDAVVVTAEEMIDIVDELGAEKAAVEIDVVTTGTFGAMCSSGAFLNFG 61
           KT+ EINE+I+ G AVV+ AEEM + V  +G EKAA E+DVVTTGTF  MCSSG   N G
Sbjct: 8   KTIAEINERIKQGKAVVLNAEEMTEAVRRMGKEKAAREVDVVTTGTFSPMCSSGLLFNIG 67

Query: 62  HSDPP-IKMCKTYLNGVEAYSGIAAVDAYLGATQTNSDDDID------ISYGGSHVLEDL 114
             +PP IK  K +LN V AY+G+AAVDAY+GAT+   DD ++        YGG HV+EDL
Sbjct: 68  QQEPPTIKTSKVWLNNVPAYAGLAAVDAYIGATEPTEDDPLNKVYPGRFKYGGGHVIEDL 127

Query: 115 VAGKEIELVAEGYTTDCYPRKKVETTITIDDLNQAILVNPRNCYQSYNGATNSTEEKIYT 174
           V GK + L AE Y TDCYPR+ ++  IT+ ++  A L NPRNCYQ+YN A N T   IYT
Sbjct: 128 VRGKSVHLRAEAYGTDCYPRRSLDKQITLAEMPFAQLWNPRNCYQNYNAAVNLTSRIIYT 187

Query: 175 YMGALLPEFGNLNYSGAGQLNPLQNDFNKETKTYNTLGMGTRIFLGGAQGYIAGSGTQH- 233
           YMG L P   N+N++ AG+L+PL ND       + T+G+GTRIFLGG+ GY+ G+GTQH 
Sbjct: 188 YMGPLKPNMRNINFATAGRLSPLFND-----PYFRTIGLGTRIFLGGSTGYVTGAGTQHV 242

Query: 234 ---------SPNGGFGTLMVQGDLKEMSTKYLRGATIPKYGSTLYMGIGIPIPVLNAEIA 284
                     P  G GTLMVQGDLK M  +YLRG +   YG TL +GIGIPIPVLN EIA
Sbjct: 243 AAPKRTDRGLPLTGAGTLMVQGDLKGMDARYLRGLSFLGYGCTLAVGIGIPIPVLNEEIA 302

Query: 285 KTCAIKDEDIAIPILDYGIPRRDKPE-----LGVTNYKDARSGKVTIEVEIEGKKVDKCM 339
               + D DI +P+ DYG    D P      +   +Y+D +SG    EVE+ GKKV+   
Sbjct: 303 WFTGVDDSDILMPVRDYG---HDYPNCLPRIIQHVSYEDLKSG----EVEVMGKKVE--- 352

Query: 340 RSASVSSYKVSREISKELKNWISNSEFMLTQRLEPLKSA 378
            S  ++SY +S EI+ +LK+WI    F LTQ +E L SA
Sbjct: 353 -SVPLTSYSISLEIADKLKSWIEKGTFTLTQPVELLPSA 390