Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 649 a.a., hypothetical protein from Phaeobacter inhibens DSM 17395

 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 80  EKCIDCGACVVHCPVGALSVDEEF-KILLDEDECIGCKNCAKICPVNAI 127
           + C  C +CV  CP GAL  + +  ++   ED C+ C  CA ICP +AI
Sbjct: 499 DNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAI 547



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 85  CGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAI 127
           C  C+  CP GA+S   +  + +D   C GC +CA +CP  AI
Sbjct: 278 CTRCLDICPTGAISPAGDH-VSIDPMICAGCGSCASLCPSGAI 319



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 9/69 (13%)

Query: 66  GEAEDIPKIIQKDDEKCIDCGACVVHCPVGA--------LSVDEEFKILLDEDECIGCKN 117
           G+  D+P++  ++D  C+ CG C   CP  A        L+ D   +++L E+E   C  
Sbjct: 517 GDNPDLPQLRFQEDA-CLQCGLCATICPEDAITYEPRLNLTPDALSQVVLHEEEPFACVE 575

Query: 118 CAKICPVNA 126
           C  +  V +
Sbjct: 576 CGSLFGVKS 584



 Score = 27.7 bits (60), Expect = 3e-04
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 17  PVVSNVVLETGVMVNILKAKMEPR-EGFLILELTGDEEQIEKSIEILKKFGEAEDIPKII 75
           P V+   L    +V I +  +  R E  L       +    + ++I    G        +
Sbjct: 239 PAVAEATLAASQLVGIFEKPLYVRTEPLLCAHSRAGQTGCTRCLDICPT-GAISPAGDHV 297

Query: 76  QKDDEKCIDCGACVVHCPVGALSVD 100
             D   C  CG+C   CP GA++ D
Sbjct: 298 SIDPMICAGCGSCASLCPSGAITYD 322



 Score = 26.6 bits (57), Expect = 7e-04
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 105 ILLDEDECIGCKNCAKICPVNAI 127
           +L+  D C  C +C  +CP  A+
Sbjct: 494 VLVSSDNCTLCLSCVSLCPSGAL 516



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 114 GCKNCAKICPVNAI 127
           GC  C  ICP  AI
Sbjct: 277 GCTRCLDICPTGAI 290