Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 188 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 44.7 bits (104), Expect = 7e-10
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 88  CVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129
           C+  CPV A +  E+  ++ D+D CIGC NC + CP  A K+
Sbjct: 67  CLEQCPVKAYTKREDGIVVHDQDACIGCGNCVRSCPYGAPKM 108



 Score = 37.7 bits (86), Expect = 9e-08
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 14/80 (17%)

Query: 62  LKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGC------ 115
           +K + + ED   I+  D + CI CG CV  CP GA  ++   K     ++C  C      
Sbjct: 73  VKAYTKRED--GIVVHDQDACIGCGNCVRSCPYGAPKMNPVEK---RAEKCSMCWQRIDA 127

Query: 116 ---KNCAKICPVNAIKIFEI 132
                C   CPV A+ I +I
Sbjct: 128 GLDPACVHSCPVGALSIADI 147



 Score = 29.6 bits (65), Expect = 2e-05
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%)

Query: 75  IQKDDEKC------IDCG---ACVVHCPVGALSVDEEFKILLD 108
           ++K  EKC      ID G   ACV  CPVGALS+ +     LD
Sbjct: 111 VEKRAEKCSMCWQRIDAGLDPACVHSCPVGALSIADISTARLD 153



 Score = 27.3 bits (59), Expect = 1e-04
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 101 EEFKILLDEDECIGCKNCAKIC 122
           ++   L+D ++CIGC  CA  C
Sbjct: 3   KQLGFLVDTEKCIGCFTCAMAC 24