Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 491 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 74  IIQKDDEKCIDCGACVVHCPVGALSVD-------EEFKILLDEDECIGCKNCAKICPVNA 126
           I + D   C  CG C   CPV A+S+         + +  +DE  C+GC  CA  CP  A
Sbjct: 351 IARCDASLCNGCGLCERACPVDAVSLPVPPGGRKRDRRCAVDEAYCLGCGACALKCPTGA 410

Query: 127 IKI 129
           +++
Sbjct: 411 LRL 413



 Score = 33.5 bits (75), Expect = 4e-06
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 78  DDEKCIDCGACVVHCPVGALSV-DEEFKILLDED 110
           D+  C+ CGAC + CP GAL +   E K+L   D
Sbjct: 392 DEAYCLGCGACALKCPTGALRLHPRERKVLHPAD 425



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 82  CIDCGAC------VVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129
           C  CG C      +       + V   F    D   C GC  C + CPV+A+ +
Sbjct: 323 CHCCGCCCNLMQGIRQWGHAGVLVTSSFIARCDASLCNGCGLCERACPVDAVSL 376