Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 61.2 bits (147), Expect = 1e-14
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 30  VNILKAKMEPREGFLILELTGDEEQIEKSIEILKKFGEAEDIPKIIQKDDEKCIDCGACV 89
           +N+L+ + +  E  ++ EL  + +   + I ++K            + D+E CI CG C 
Sbjct: 94  INVLEGRAKLEEDTVVYELK-EIDVTHRKIRLVKH-----------ELDEESCIKCGICE 141

Query: 90  VHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129
             CP  A++V++   I ++ D C+GC  C K+CP +AIK+
Sbjct: 142 RFCPTSAITVEKRNSIDINLDLCMGCTACEKVCPKSAIKV 181



 Score = 49.7 bits (117), Expect = 3e-11
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 44  LILELTGDEEQIEKS-IEILKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEE 102
           L +  T  E+   KS I++  + GE     +I   +D  CI+C  C   CPVGA+ V E+
Sbjct: 163 LCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDT-CINCMVCSEICPVGAI-VYED 220

Query: 103 FKILLDEDECIGCKNCAKICPVNAIKI 129
             + LD+  CI C  C K CPV AI I
Sbjct: 221 GLMKLDDKMCIFCGKCEKNCPVTAIAI 247



 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 11/86 (12%)

Query: 55  IEKSIEILKKFGEAE------DIPKIIQKDDEKCIDCGACVVHCPVGAL---SVDEEFKI 105
           I K++ I +KF + +       + + +  +  KCI C  C   CPV A+   SV    +I
Sbjct: 15  ISKNLGIDEKFVKEKLKDLMVPVERNLYVESNKCIRCELCYEVCPVDAIKEPSVKSPAEI 74

Query: 106 LLDEDECIGCKNCAKICPVNAIKIFE 131
           +   ++C+ C+ CAK CPV AI + E
Sbjct: 75  I--PEKCVKCEICAKTCPVGAINVLE 98



 Score = 33.1 bits (74), Expect = 3e-06
 Identities = 11/29 (37%), Positives = 21/29 (72%)

Query: 74  IIQKDDEKCIDCGACVVHCPVGALSVDEE 102
           +++ DD+ CI CG C  +CPV A+++ ++
Sbjct: 222 LMKLDDKMCIFCGKCEKNCPVTAIAIKQK 250