Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 79  DEKCIDCGACVVHCPVGALSVDEEFKIL-LDEDECIGCKNCAKICPVNAIKI 129
           D  C+ C  C+  CP  A+S+ E  K   +D+ ECI C  C+ +CP +AI +
Sbjct: 318 DGGCVLCEVCIKECPEDAISIKERSKFTSIDKKECIACGTCSMVCPNDAITV 369



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 22/103 (21%)

Query: 46  LELTGDEEQIEKSIEILKKFGEAEDIP-----KIIQK-----------DDEKCIDCGACV 89
           L+ T ++  +E+   I K  G+  + P     KI++            D EKC++CG C+
Sbjct: 129 LKNTKNKMLMERYSTIFKMMGKTYEFPEQKHVKIVKPTERMLRHSISIDSEKCVECGKCI 188

Query: 90  VHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFEI 132
             CP   + ++ E       D C  C  C ++CPV+AIK  E+
Sbjct: 189 YVCPKDTI-IEAEI-----VDGCTRCNICNEVCPVDAIKYGEV 225



 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 21/59 (35%), Positives = 28/59 (47%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFE 131
           K+I      CI CG C   CP GA+  +E     ++   C GC  C   CP++ I I E
Sbjct: 36  KMIDGKAFSCITCGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNACPIDIIDIRE 94



 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 75  IQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIF 130
           I+ DD  C+ CG C + CP  A+   E     +  + C  C  C  ICP  AI+I+
Sbjct: 423 IRVDDGYCVKCGLCTIICPNDAIDKGE-----ITTERCEYCSACVNICPTRAIRIY 473



 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 79  DEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICP 123
           ++ CI+CG CV  CP  AL   E  KIL D   C  C  C K CP
Sbjct: 263 EKHCINCGLCVDKCPSNALRF-ENGKILYDPKTCTLCNTCVKECP 306



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 9/57 (15%)

Query: 80  EKCIDCGACVVHCPVGALSVDEEFKILLDEDE--------CIGCKNCAKICPVNAIK 128
           E CI CG C+  CP  AL +  EFK++  +++        CI C  C   CP NA++
Sbjct: 227 ENCILCGNCISKCPKDALEI-SEFKVVKTKEDVKANPEKHCINCGLCVDKCPSNALR 282



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 9/63 (14%)

Query: 79  DEKCIDCGACVVHCPVGALSVDEEFK---------ILLDEDECIGCKNCAKICPVNAIKI 129
           ++ C+ C  C +HCP   +     +K         I +D+  C+ C  C  ICP +AI  
Sbjct: 388 NDNCVLCEKCAIHCPRDVIENTSGYKKVVDPENSYIRVDDGYCVKCGLCTIICPNDAIDK 447

Query: 130 FEI 132
            EI
Sbjct: 448 GEI 450



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSV---------DEEFKILLDEDECIGCKNCAKICP 123
           K    D ++CI CG C + CP  A++V         ++    ++  D C+ C+ CA  CP
Sbjct: 343 KFTSIDKKECIACGTCSMVCPNDAITVKIDSLNFSGNKVHSEVIFNDNCVLCEKCAIHCP 402

Query: 124 VNAIK 128
            + I+
Sbjct: 403 RDVIE 407



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 82  CIDCGACVVHCPVGALSVDEEFK-ILLDEDECIGCKNCAKICPVNAIKIFE 131
           C  CG C   CP+  + + E+          C+ C  C   CP NA   F+
Sbjct: 75  CTGCGICKNACPIDIIDIREDSTGKAYPTGMCVMCGLCTTECPYNARLYFD 125



 Score = 28.5 bits (62), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 5/27 (18%)

Query: 110 DECIGCKN-----CAKICPVNAIKIFE 131
           +EC  CK+     C ++CP NAIK+ +
Sbjct: 13  EECENCKSKEISKCMEVCPTNAIKMID 39