Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 80  EKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAI 127
           E C+ CG C+  CPVGALS++ E K ++D++ CI C  CA+ CP NAI
Sbjct: 133 EDCVGCGVCISECPVGALSIEGE-KAVVDKNSCIYCSICAQTCPWNAI 179



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 23/92 (25%)

Query: 58  SIEILKKFGEAEDIP-KIIQKDDEKCIDCGACVVHCPVGALSV----------------D 100
           +IE++ ++G  + I  + I  D+EKC  CG C + CP  A++V                 
Sbjct: 245 AIELVVEYGSPKPITDEGIVWDEEKCAYCGPCAIKCPNNAINVVNPKGLEMPSRKKTEKA 304

Query: 101 EEFKILLDEDECIGCKNCAKICPVNAIKIFEI 132
            EFK+      CI C  C + CP +A++I +I
Sbjct: 305 NEFKM------CIRCGACVQSCPNDALRIGKI 330



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 9/57 (15%)

Query: 82  CIDCGACVVHCPVGALSVDEEF---------KILLDEDECIGCKNCAKICPVNAIKI 129
           C  CG C+  CPV A+ +  E+          I+ DE++C  C  CA  CP NAI +
Sbjct: 231 CPACGLCMAACPVDAIELVVEYGSPKPITDEGIVWDEEKCAYCGPCAIKCPNNAINV 287



 Score = 37.4 bits (85), Expect = 2e-07
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 74  IIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFEI 132
           +I+ + E C  C AC   CP  AL ++  FK+      C  C NC   CP +A+ + EI
Sbjct: 1   MIKINTEDCYMCKACENSCPTEALKLNP-FKV------CQLCGNCVNACPNDALNLREI 52



 Score = 35.4 bits (80), Expect = 9e-07
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 13/60 (21%)

Query: 82  CIDCGACVVHCP---VGALSVDEEFK---------ILLDEDECIGCKNCAKICPVNAIKI 129
           C+ C  CV  CP   VG   V E  K         I + ED C+GC  C   CPV A+ I
Sbjct: 94  CVGCMKCVEACPDDYVGMEGVVEPAKRNITLPKEPIAVTED-CVGCGVCISECPVGALSI 152



 Score = 33.9 bits (76), Expect = 3e-06
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 73  KIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICP 123
           K I+    KC  CG CV  CP      +++ K       C+GC  C + CP
Sbjct: 60  KQIEYFPTKCDLCGECVKVCPNNLKIENDKLK-----GFCVGCMKCVEACP 105



 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 36  KMEPREGFLILELTGDEEQIEKSIEILKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVG 95
           KM  R G  +     D  +I K I   K++   E  P +       C  CG C+  CP  
Sbjct: 308 KMCIRCGACVQSCPNDALRIGKIIHDGKEYERIEFSPNL-------CDSCGKCIETCPYD 360

Query: 96  ALSVDEEFKILLDEDECIGCKNCAKIC 122
            L++  + +  L E  C+ C  C + C
Sbjct: 361 MLNLTGKPEKPL-EGFCVMCLKCIEAC 386



 Score = 30.0 bits (66), Expect = 4e-05
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 82  CIDCGACVVHCPVGALSVDEEF-------KILLDEDECIGCKNCAKICPVN 125
           C  CG CV  CP  AL++ E         +I     +C  C  C K+CP N
Sbjct: 32  CQLCGNCVNACPNDALNLREIELNGKTIKQIEYFPTKCDLCGECVKVCPNN 82