Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 637 a.a., protein containing 4Fe-4S ferredoxin, iron-sulfur binding, subgroup domains from Marinobacter adhaerens HP15

 Score = 43.1 bits (100), Expect = 7e-09
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 63  KKFGEAEDIPK-----IIQKDDEKCIDCGACVVHCPVGAL-SVDEEFKILLDEDECIGCK 116
           +K  E   +PK      I+ D +KC  C ACV  CP GAL    +  ++   E+ C+ C 
Sbjct: 469 EKIEEPIPLPKGAPYGAIEIDSDKCTLCLACVSLCPTGALGDHPDRPEVQFTENACVQCG 528

Query: 117 NCAKICPVNAIKI 129
            C   CP  AI +
Sbjct: 529 ICESTCPETAITL 541



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 85  CGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKIFE 131
           C  C+  CP  A+    +  I +D D C GC +CA +CP +A+ + E
Sbjct: 269 CTRCLDVCPTEAIFSFGDH-IQIDSDICAGCGSCAAVCPTSAVTMNE 314



 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 75  IQKDDEKCIDCGACVVHCPVGALSVDE 101
           IQ D + C  CG+C   CP  A++++E
Sbjct: 288 IQIDSDICAGCGSCAAVCPTSAVTMNE 314



 Score = 27.7 bits (60), Expect = 3e-04
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 66  GEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDEEFKI 105
           G+  D P++ Q  +  C+ CG C   CP  A+++  +  +
Sbjct: 509 GDHPDRPEV-QFTENACVQCGICESTCPETAITLKPQLDV 547



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 114 GCKNCAKICPVNAIKIF 130
           GC  C  +CP  AI  F
Sbjct: 268 GCTRCLDVCPTEAIFSF 284