Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 652 a.a., heterodisulfide reductase, A subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 53.1 bits (126), Expect = 7e-12
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 66  GEAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVDE---EFKILLDEDECIGCKNCAKIC 122
           G+ E  P+I Q D  +CI CG C+  CP GA+   E   E K  + E  C GC  C   C
Sbjct: 568 GKLESDPQISQVDVRRCIGCGKCITTCPYGAIEWMELRGETKARVIETVCQGCGICTVTC 627

Query: 123 PVNAIKI 129
           P  AI++
Sbjct: 628 PQGAIQL 634



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 85  CGACVVHCPVGALSVDEEFKILLDE 109
           CG C   CP GA+  D E +I++++
Sbjct: 298 CGVCAKMCPTGAIRYDMEDEIVVED 322



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 107 LDEDECIGCKNCAKICPVNAIKIFEI 132
           +D   CIGC  C   CP  AI+  E+
Sbjct: 579 VDVRRCIGCGKCITTCPYGAIEWMEL 604



 Score = 27.3 bits (59), Expect = 4e-04
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 23/74 (31%)

Query: 78  DDEKCIDCGACVVHCP-----------VGALS-VDEEF------KILLDEDECIG----- 114
           D + C  CG C+  CP           VG  + ++  F      K ++D   C       
Sbjct: 238 DWDLCTGCGLCMEKCPSRKSPDAFNEHVGVTTAINIPFPQAIPKKAIIDPTACRQFVKGK 297

Query: 115 CKNCAKICPVNAIK 128
           C  CAK+CP  AI+
Sbjct: 298 CGVCAKMCPTGAIR 311



 Score = 22.7 bits (47), Expect = 0.010
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 107 LDEDECIGCKNCAKICP 123
           +D D C GC  C + CP
Sbjct: 237 VDWDLCTGCGLCMEKCP 253