Pairwise Alignments

Query, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 421 a.a., periplasmic [Fe] hydrogenase, large subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 75  IQKDDEKCIDCGACVVHCPVGALSVD-EEFKILLDEDECIGCKNCAKICPVNAI 127
           +Q D+ KCI C  C  +CP  A+  +  E   +   + CI C  C   CP NAI
Sbjct: 28  VQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENAI 81



 Score = 35.8 bits (81), Expect = 7e-07
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)

Query: 61 ILKKFGEAEDIPKIIQKDDEKCIDCGACVVHCPVGAL 97
          I  + GE   IP I     E CI+CG C+ HCP  A+
Sbjct: 50 IFGEMGEPHSIPHI-----EACINCGQCLTHCPENAI 81



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 90  VHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAI 127
           +H P      D+   + +DE +CIGC  C++ CP  AI
Sbjct: 13  MHTPDPKADPDKLHFVQIDEAKCIGCDTCSQYCPTAAI 50