Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 274 a.a., tRNA(Cytosine32)-2-thiocytidine synthetase from Pseudomonas fluorescens FW300-N2E2

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 27/248 (10%)

Query: 31  KRKVRKTLGRDVLKNNI-----KVAMGLSGGKDSLVMAYLLNEYYKQIP-NSNLIAIMVN 84
           ++++R+  G  V   N+     KV + LSGGKDS  +  +L    K  P   +++A+ ++
Sbjct: 12  QKRLRRLAGEAVADFNMIEDGDKVMVCLSGGKDSYTLLDVLMHLQKVAPIKFDIVAVNMD 71

Query: 85  EGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPCSFCGV 144
           +   G+    + A   + E  G+EY IV    Y  + + E++   K        CS C  
Sbjct: 72  QKQPGFPEHVLPA---YLESLGVEYHIVEKDTY--SVVKELIPEGK------TTCSLCSR 120

Query: 145 IRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMN-YIEGDVKKLAFLGKSLKHPKFVKRI 203
           +RR  L   + E     +A+GH+ DD+ +   +N +  G +K +    ++      V  I
Sbjct: 121 LRRGTLYTFADEIGATKMALGHHRDDIVETFFLNMFYNGSLKAMPPKLRADDGRNVV--I 178

Query: 204 KPLEKIPEDEVLLLAEMLELKYHKSPCPYSCLS----FRSEVSDITDNLEKNHPGSKYSI 259
           +PL    E ++   ++  +  +   PC   C S     R  V ++    E+  PG   SI
Sbjct: 179 RPLAYCSEKDIQAYSDFKQ--FPIIPCNL-CGSQENLQRQVVKEMLQEWERKTPGRTESI 235

Query: 260 VRGYERLL 267
            RG + ++
Sbjct: 236 FRGLQNVI 243