Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 319 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 27/239 (11%)

Query: 27  IKETKRKVRKTLGRDVLKNNI-----KVAMGLSGGKDSLVMAYLLNEYYKQIPNS-NLIA 80
           + + ++++R+ +G  +   N+     +V   LSGGKDS  M  +L    ++ P S  ++A
Sbjct: 17  LNKLQKRLRREVGSAIADYNMIEEGDRVMCCLSGGKDSYAMLDILINLQQRAPVSFEIVA 76

Query: 81  IMVNEGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPCS 140
           + +++   G+    + A   + E  G+ + I+    Y       IVK    +  T   CS
Sbjct: 77  VNLDQKQPGFPEHVLPA---YLETLGVPFHILEKDTY------SIVKDKIPEGKTT--CS 125

Query: 141 FCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNYIEGDVKKLAFLGKSLKHPKFV 200
            C  +RR  L   +       +A+GH+ DD+ + + +N   G  K  A   K L      
Sbjct: 126 LCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFYGG-KMKAMPPKLLSDDGAN 184

Query: 201 KRIKPLEKIPEDEVLLLAEMLELK-YHKSPCPYSCLS----FRSEVSDITDNLEKNHPG 254
             I+PL    E ++   AE  ELK +   PC   C S     R+ V D+    ++ HPG
Sbjct: 185 VVIRPLAYCREKDI---AEYAELKQFPIIPCNL-CGSQENLKRAAVKDMLKQWDRQHPG 239