Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 295 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Phaeobacter inhibens DSM 17395

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 26/217 (11%)

Query: 53  LSGGKDSLVMAYLLNEY-YKQIPNSNLIAIMVNEGIEGYRTDGIDAAVKFCEEYGIEYKI 111
           LSGGKDS  +  +L E  ++ +   +L+A  +++G  G+    +    +F E+ G+ ++I
Sbjct: 58  LSGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPATVLP---EFLEKMGVPHRI 114

Query: 112 VHFKDYLGTNLDEIVKIAKEKNLTMNPCSFCGVIRRKILNRVSIEEKCDFLAIGHNLDDV 171
               +Y  T    + K+ + +      C+ C  +RR  L R++ EE C  + +GH+ DD+
Sbjct: 115 ----EYQDTYSIVMDKVPQGRTF----CALCSRLRRGNLYRIAREEGCSAVVLGHHRDDI 166

Query: 172 AQAVMMNYIEGDVKKLAFLGKSLKHPK---FVKRIKPLEKIPEDEVLLLAEMLELKYHKS 228
            +   MN   G   +LA +   L + +   FV   +PL  + E +    A+   L Y   
Sbjct: 167 LETFFMNLFHGG--RLATMPPKLVNEEGDLFV--FRPLAHVAEVDCEKFAK--ALNYPII 220

Query: 229 PCPYSCLS----FRSEVSDITDNLEKNHPGSKYSIVR 261
           PC   C S     R +V  I D  E N PG +  + R
Sbjct: 221 PCDL-CGSQDGLQRQQVKQILDQWESNSPGRRQVMFR 256