Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 317 a.a., PP-loop domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 29/240 (12%)

Query: 27  IKETKRKVRKTLGRDVLKNNI-----KVAMGLSGGKDSLVMAYLLNEYYKQIP-NSNLIA 80
           + + ++++R+ +G  +   N+      V   LSGGKDS  M  +L    ++ P N NL+A
Sbjct: 14  LNKLQKRLRREVGSAIADYNMIEEGDTVMCCLSGGKDSYAMLDILVNLLQRAPVNFNLVA 73

Query: 81  IMVNEGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPCS 140
           + +++   G+  D + A   + +   + Y I+    Y       IVK    +  T   CS
Sbjct: 74  VNLDQKQPGFPEDILPA---YLDSLKVPYHILEKDTY------SIVKDKIPEGKTT--CS 122

Query: 141 FCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMN-YIEGDVKKLAFLGKSLKHPKF 199
            C  +RR  L   + +     +A+GH+ DD+ + + +N +  G +K  A   K L     
Sbjct: 123 LCSRLRRGTLYGFAQKIGATKIALGHHRDDIIETMFLNMFYAGKLK--AMPPKLLSDDGA 180

Query: 200 VKRIKPLEKIPEDEVLLLAEMLELK-YHKSPCPYSCLS----FRSEVSDITDNLEKNHPG 254
              I+PL    E ++   AE  ELK +   PC   C S     R+ V ++  + +K  PG
Sbjct: 181 NVVIRPLAYSREKDI---AEYAELKAFPIIPCNL-CGSQENLKRAAVKEMLKSWDKQFPG 236