Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 311 a.a., PP-loop domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  114 bits (285), Expect = 3e-30
 Identities = 83/306 (27%), Positives = 145/306 (47%), Gaps = 27/306 (8%)

Query: 1   MKCRKCGKPSIYHQKHSGNNYCKECFIKETKRKVRKTLG-RDVLKNNIKVAMGLSGGKDS 59
           MKC++C + ++         +C ECF+    R+V + +  R +  ++ ++ + LSGGKDS
Sbjct: 1   MKCKRCKETAVVALPSHHTGFCAECFLLFFTRQVERGIKERKLFTHDDRILVALSGGKDS 60

Query: 60  LVMAYLLNEYYKQIPNSNLIAIMVNEGIEGYRTDGIDAAVKFCEEYGIEYKIVHFKDYLG 119
           L +   L+         ++  + ++  I G          +FCE++G+   IV      G
Sbjct: 61  LSLMLELSRL-----GYDVTGLHIDLAIPGSSPAARGVVERFCEKHGLNL-IVKEMGAEG 114

Query: 120 TNLDEIVKIAKEKNLTMNPCSFCGVIRRKILNRVSIEEKCDFLAIGHNLDDVAQAVMMNY 179
             + ++     +  L    CS CG I+R   N+ +++E    LA GHNLDD    +  N 
Sbjct: 115 LAIPDV-----KARLNRPVCSACGKIKRYFFNKTALDENFTVLATGHNLDDEIARLFSNT 169

Query: 180 IEGDVKKLAFLGKSL-KHPKFVKRIKPLEKIPEDEVLLLAEMLELKYHKSPCPYSCLSFR 238
           +  DV  L+  G  L     F +++KPL ++ E E    A ++ +++H +PCPYS  +  
Sbjct: 170 LRWDVAYLSDQGPDLAADGGFARKVKPLWRLSEFETANYAFLMGIEHHYAPCPYSGGASF 229

Query: 239 SEVSDITDNLEKNHPGSKYSIVRGY-ER---------LLEHIELPGYTGECKICGDLSAT 288
           +    +  +LE+  PG K    +G+ ER           + ++L G    C  CG  ++ 
Sbjct: 230 TFYKKLLTDLEEEMPGRKLDFYQGFLERGRPVFARADNEDGVDLSG----CTRCGYPTSN 285

Query: 289 EVCKVC 294
           EVC VC
Sbjct: 286 EVCGVC 291