Pairwise Alignments

Query, 311 a.a., TIGR00269 family protein from Methanococcus maripaludis S2

Subject, 372 a.a., tRNA-specific 2-thiouridylase MnmA (RefSeq) from Shewanella sp. ANA-3

 Score = 45.1 bits (105), Expect = 3e-09
 Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 13/218 (5%)

Query: 48  KVAMGLSGGKDSLVMAYLLNEYYKQIPNSNLIAIMVNEGIE-GYRTDGIDAAVKFCEEYG 106
           KV +G+SGG DS V AYLL +   Q+    +     ++  E     + +  A   C++ G
Sbjct: 12  KVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKLG 71

Query: 107 IEYKIVHFKDYLGTNLDEIVKIAKEKNLTMNPCSFCG--VIRRKILNRVSIEEKCDFLAI 164
           I+   V+F      N+ E      +   T NP   C   +  +  L+        D++A+
Sbjct: 72  IKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFADDILDADYIAM 131

Query: 165 GH------NLDDVAQAVMMNYIEGDVKKLAFLGKSLKHPKFVKRIKPLEKIPEDEVLLLA 218
           GH      N D   Q  M+  ++ +  +  FL  +L H +  + + P+ ++ + EV  +A
Sbjct: 132 GHYVRRRDNADGTTQ--MLRGVDNNKDQSYFL-YTLSHEQVARSLFPVGELEKHEVREIA 188

Query: 219 EMLELKYH-KSPCPYSCLSFRSEVSDITDNLEKNHPGS 255
           + + L  H K      C     + ++   N     PG+
Sbjct: 189 KKMGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGN 226