Pairwise Alignments

Query, 383 a.a., tRNA 4-thiouridine(8) synthase ThiI from Methanococcus maripaludis S2

Subject, 484 a.a., thiazole biosynthesis/tRNA modification protein ThiI from Pseudomonas stutzeri RCH2

 Score =  122 bits (307), Expect = 2e-32
 Identities = 101/378 (26%), Positives = 184/378 (48%), Gaps = 21/378 (5%)

Query: 3   KFIVR-YGEIGTKSRQTMHRFEKLLAKNISKLAKKHGISAEVEIIHTRLIVDVPEENFEK 61
           K IV+ + EI  KS      F + LAKNI  + ++      VE +   + V+      + 
Sbjct: 2   KLIVKVFPEITIKSPPVRKGFIRQLAKNIRTVLRELDPDLRVEGVWDNIEVETALSEPKL 61

Query: 62  MKELLKKVPGIVSFSPCYYI-DPDIEQIKKISSELFEKEIERYENKENITFRVKTQRPQK 120
           ++E+++++      + C  + +  +  +  I +       ER   K    F V+ +R  K
Sbjct: 62  LREMIERLRCTPGIAHCLEVHEYPLGDLDDIVARCKAHYAERLPGK---IFAVRCKRAGK 118

Query: 121 KFPLTSLEVNMEVGGPISEKYGIK-VDLKNPTISLDIEVFNEYAYVFAKRIEGIGGIPVG 179
             P +S++V   VG  + ++     + LK P + + +E+ ++  +V  ++ +GIGG P+G
Sbjct: 119 H-PFSSMDVERHVGSQLRQQCAAAGISLKKPEVEVRMEIRDQRLFVVHEQHDGIGGYPLG 177

Query: 180 TQGKVIVLLSDGIDSPVSAYMMAKRGCKLLLLHM-------KTSDEGLEKTQKLVDVLSD 232
              + +VL+S G DS V+AY M +RG   L+ H        +  + G+ +    +     
Sbjct: 178 ALEQTLVLMSGGFDSTVAAYQMMRRG---LMTHFCFFNLGGRAHELGVMEVAHYLWKKYG 234

Query: 233 FDPEAKFVYVDFNEELAKIKAELTEINRDKYTCLYCKKYMLKLAEKHAKWHKCDAIVNGD 292
                 F+ V F E + +I   L +++  +   +  K+ ML+++ + A+    DA+V G+
Sbjct: 235 SSHRVLFISVPFEEVVGEI---LQKVDNSQMGVVL-KRMMLRVSTQIAERLHIDALVTGE 290

Query: 293 NMGQVASQTLKNLRVISEGIDYPILRPLIGLDKVEIMDIARKIGTFDISTSKEVSCFAVP 352
            + QV+SQTL NL VI    D  +LRPLI   K +I+D A +IGT + + +    C  + 
Sbjct: 291 AISQVSSQTLPNLSVIDSATDMLVLRPLIASHKQDIIDTAFEIGTAEFAKNMPEYCGVIS 350

Query: 353 KHPITNATPDEMEKIEEQ 370
            +P T A    +E  E+Q
Sbjct: 351 VNPTTKAKRYRIEHEEKQ 368