Pairwise Alignments

Query, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis S2

Subject, 313 a.a., C32 tRNA thiolase from Sinorhizobium meliloti 1021

 Score = 47.0 bits (110), Expect = 6e-10
 Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 43/258 (16%)

Query: 21  DKIIVGNKGLARLSKEKMKKIENDFGIPVVYSRVFEEISERMGRFVSKNNIISPKDKILV 80
           D +IV +      +     ++ +      +  R+  ++ + +  F     ++    + LV
Sbjct: 31  DSVIVDDAAFEGAAHPLFSRMPSSVSFNKLRKRLLRQVRQALDDF----GMLKGSRRWLV 86

Query: 81  GLSGGKDSLALLHLLE--PYRRKYGVQIYAVTVDLNINGIRPWTESNKNVEKIAEHCKNL 138
           G+SGGKDS +LL LL    +R    V++ A  +D          + N     + ++ +++
Sbjct: 87  GVSGGKDSYSLLALLMDLQWRGLLPVELVACNLDQG--------QPNFPKHVLPDYLRSI 138

Query: 139 NIPHKIIAHDGNVVEMSKILSENTKGIEYSPCFSCSMVRRHVLTNYAKNNFESDSNVKIA 198
            + H+I   D   +   K+      G  Y  C  CS +RR  L    +     +    + 
Sbjct: 139 GVKHRIEYRDTYSIVKEKV----PAGATY--CSLCSRLRRGNLYRIGR----EEGCDALV 188

Query: 199 IGHTLEDNSDTIMANIFKGNIIKALEPIKNFNETDVDFKDFKLNLKSCCMIRPMLNVSEE 258
           +GH  ED  +T   N F G  + ++ P K  N+                ++RP+   +E+
Sbjct: 189 LGHHREDILETFFMNFFHGGRLASM-PAKLLNDEG-----------DLTVLRPLAYAAED 236

Query: 259 KIVK-------ALVECDI 269
            + K        ++ CD+
Sbjct: 237 DLAKFAAAMEFPIIPCDL 254