Pairwise Alignments

Query, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis S2

Subject, 295 a.a., tRNA 2-thiocytidine biosynthesis protein TtcA from Phaeobacter inhibens DSM 17395

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 50/250 (20%)

Query: 77  KILVGLSGGKDSLALLHLLE--PYRRKYGVQIYAVTVDLNINGIRPWTESNKNVEKIAEH 134
           K LV LSGGKDS  LL +L    +R    V + A  +D    G  P T        + E 
Sbjct: 53  KWLVCLSGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGF-PAT-------VLPEF 104

Query: 135 CKNLNIPHKIIAHDGNVVEMSKILSENTKGIEYSPCFSCSMVRRHVLTNYAKNNFESDSN 194
            + + +PH+I   D   + M K+    T       C  CS +RR  L   A+     +  
Sbjct: 105 LEKMGVPHRIEYQDTYSIVMDKVPQGRTF------CALCSRLRRGNLYRIAR----EEGC 154

Query: 195 VKIAIGHTLEDNSDTIMANIFKGNIIKALEPIKNFNETDVDFKDFKLNLKSCCMIRPMLN 254
             + +GH  +D  +T   N+F G  +  + P K  NE    F           + RP+ +
Sbjct: 155 SAVVLGHHRDDILETFFMNLFHGGRLATMPP-KLVNEEGDLF-----------VFRPLAH 202

Query: 255 VSE---EKIVKAL----VECDIEYYHDKDECPYSRHNGNGIRKKSHEVLESIEEDVPNIR 307
           V+E   EK  KAL    + CD+    D  +           R++  ++L+  E + P  R
Sbjct: 203 VAEVDCEKFAKALNYPIIPCDLCGSQDGLQ-----------RQQVKQILDQWESNSPGRR 251

Query: 308 EMVISSILNS 317
           +++  +++N+
Sbjct: 252 QVMFRALMNA 261