Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 442 a.a., (dimethylallyl)adenosine tRNA methylthiotransferase from Pseudomonas fluorescens FW300-N2C3

 Score = 74.7 bits (182), Expect = 5e-18
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 41/300 (13%)

Query: 137 DLDFSKIYVPKDIAAQNVRGANVYIETHRGCLGHCTFCQVPEFFGRDIRSKPIELIIEEV 196
           D+ F +I     +    + G + Y+    GC  +CTFC VP   G ++ S+P + +I E+
Sbjct: 127 DVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEV-SRPFDDVIAEI 185

Query: 197 NELKKNGVNRIAISG----GTGSLYNFKNTVNKNKFIEMIESVSNIIG-RQNLSVPDMRV 251
             L +NGV  + + G    G   L +     +  + I ++ +V  I   R   S P   +
Sbjct: 186 IHLAENGVREVTLLGQNVNGYRGLTHDGRLADLAELIRVVAAVDGIDRIRYTTSHP---L 242

Query: 252 DYVDE------EVLNAIKNYSIGWVFYGIESGSDKLLNSMKKGTNS---KKNLKAIELAK 302
           ++ D       EV   +K+  +      ++SGSD++L +MK+   +   K  L+ +  A 
Sbjct: 243 EFSDSLIQAHAEVPELVKHLHL-----PVQSGSDRILAAMKRNHTALEYKSKLRKLRAAV 297

Query: 303 DCGVKVAGSFIVGHPKEKEVDFLMTKDFIVDAELD--DVFVSAAEP-IPKTELCTEVLNT 359
             G+ ++  FIVG P E E DF  T   I D   D    FV +  P  P  +L       
Sbjct: 298 P-GICISSDFIVGFPGETEKDFQQTMKLIEDVGFDFSYSFVYSQRPGTPAADLA------ 350

Query: 360 KMDENPTFISHNGPYRRYGLKENEARAYDLMLHSEMWKSTPRVITTNLSKVYLDEAKMQG 419
             D+ P  +       R    ++        +  +M  S  R++ T+ SK   D  ++QG
Sbjct: 351 --DDTPEELKK----ERLNALQHRLNQQGFEISRQMVGSVQRILVTDYSK--KDPGELQG 402