Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 34/316 (10%)

Query: 45  SDIVILSLYSTLNIIDPVIKDTVDYLKS---KNIKIYVAGPVSAYPEIILNELNVDGVIL 101
           SD+VI++   T   ID  +++++D +     +N K+ V G + A  + I     V   +L
Sbjct: 70  SDVVIVN---TCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQ---VHPNVL 123

Query: 102 GEGELTTPEIINGSKDGLAYFENGEMIVNKPKSKPDLDFSKIYVPKDIAAQNVRGANVYI 161
           G         I G        E+      KP   P   F+ + VP D   +       Y+
Sbjct: 124 G---------ITGPHAYQNVLEHVHQYAPKPAHNP---FTSL-VP-DHGVKLTPKHYAYL 169

Query: 162 ETHRGCLGHCTFCQVPEFFGRDIRSKPIELIIEEVNELKKNGVNRIAISGGTGSLYNFKN 221
           +   GC   CTFC +P   G D+ S+P+  II E   LK  GV  + +     S Y    
Sbjct: 170 KISEGCNHRCTFCIIPSMRG-DLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDT 228

Query: 222 T-----VNKNKFIEMIESVSNIIGRQNLSVPDMRV---DYVDEEVLNAIKNYSIGWVFYG 273
                  N +     I+++S  +G+  + V    V    +VDE +    +   + ++   
Sbjct: 229 KHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIP 288

Query: 274 IESGSDKLLNSMKKGTNSKKNLKAIELAKDC--GVKVAGSFIVGHPKEKEVDFLMTKDFI 331
            +  S ++L  MK+   +++ L+ I+  ++    + +  +FIVG P E E DF +  D++
Sbjct: 289 FQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWL 348

Query: 332 VDAELDDVFVSAAEPI 347
            +A+LD V      P+
Sbjct: 349 KEAQLDRVGCFKYSPV 364