Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 440 a.a., (dimethylallyl)adenosine tRNA methylthiotransferase MiaB from Phaeobacter inhibens DSM 17395

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 33/275 (12%)

Query: 74  NIKIYVAGPVSAYP--EIILNELNVDGVILGEGELTTPEIINGSKDGLAYFENG------ 125
           ++KI VAG V+     EI+  +  VD V+  +     PE+   +++G    +        
Sbjct: 76  DLKIGVAGCVAQAEGQEIMRRQPLVDLVVGPQSYHRLPEMEAKAREGEKVLDTDFPEEDK 135

Query: 126 -EMIVNKPKSKPDLDFSKIYVPKDIAAQNVRGANVYIETHRGCLGHCTFCQVPEFFGRDI 184
            E + N+PK+K                   RG   ++    GC   C FC VP   G ++
Sbjct: 136 FEKLKNRPKAK-------------------RGPTAFLTVQEGCDKFCAFCVVPYTRGAEV 176

Query: 185 RSKPIELIIEEVNELKKNGVNRIAISGGTGSLYNFKNTVNKNKFIEMIESVSNIIGRQNL 244
            S+P + I+ E  +L + GV  I + G   + Y+           ++I  +  + G + +
Sbjct: 177 -SRPADRILREAQDLVERGVREITLLGQNVNAYHGAGPNGDMTLAQLIWELDKVDGLERI 235

Query: 245 SVPDMRVDYVDEEVLNAIKNYS--IGWVFYGIESGSDKLLNSMKKGTNSKKNLKAIELAK 302
                  + + ++++ A    +  + ++   +++GSDK+L  M +   ++  L+ IE  +
Sbjct: 236 RFTTSHPNDMQDDLIEAHGTCAKLMPYLHLPVQAGSDKILKRMNRAHTAESYLRLIERIR 295

Query: 303 DC--GVKVAGSFIVGHPKEKEVDFLMTKDFIVDAE 335
                + ++G FIVG P+E E DF  T D + + +
Sbjct: 296 AARPDILISGDFIVGFPEETEADFQATLDLVEEVK 330