Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 474 a.a., tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) from Shewanella loihica PV-4

 Score = 74.3 bits (181), Expect = 8e-18
 Identities = 57/240 (23%), Positives = 111/240 (46%), Gaps = 11/240 (4%)

Query: 126 EMIVNKPKSKPDLDFSKIYVPKDIAAQNVRGANVYIETHRGCLGHCTFCQVPEFFGRDIR 185
           E I    K+  D+ F +I     +      G + ++    GC  +C+FC VP   G ++ 
Sbjct: 116 EQIQQGGKAVIDVSFPEIEKFDRLPEPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEV- 174

Query: 186 SKPIELIIEEVNELKKNGVNRIAISGGTGSLY-NFKNTVNKNKFIEMIESVSNIIGRQNL 244
           S+P++ +I E+ +L + GV  + + G   + Y    +  +   F E++  V+ I G   +
Sbjct: 175 SRPVDDVILEIAQLAEQGVREVNLLGQNVNAYRGATHDDDICTFAELLRYVAAIDGIDRI 234

Query: 245 SVPDMRVDYVDEEVLNAIKNYS--IGWVFYGIESGSDKLLNSMKKG---TNSKKNLKAIE 299
                      +++++  ++    + ++   ++SGSD +L  MK+G      K  ++ + 
Sbjct: 235 RFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRLR 294

Query: 300 LAKDCGVKVAGSFIVGHPKEKEVDFLMTKDFIVDAELDDVF---VSAAEPIPKTELCTEV 356
            A+   ++++  FIVG P E + DF  T   I D + D  F    SA    P ++L  +V
Sbjct: 295 KARP-DIQISSDFIVGFPGESKQDFADTMKLIEDVQFDHSFSFIYSARPGTPASDLPDDV 353