Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 481 a.a., MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 42/312 (13%)

Query: 45  SDIVILSLYSTLNIIDPVIKDTVDYLKS---KNIKIYVAGPVSAYPEIILNELNVDGVIL 101
           +D+VI++   T   ID  +++++D ++    +N K+ V G + A  E  + E++ D +  
Sbjct: 75  ADLVIVN---TCGFIDAAVEESLDAVREALEENGKVIVTGCLGA-KENQIREVHPDVL-- 128

Query: 102 GEGELTTPEIINGSKDGLAYFENGEMIVNKPKSKPDLDFSKIYVPKDIAAQNVRGANVYI 161
              E+T P          A  ++    V KP+  P   F+ +     +       A  Y+
Sbjct: 129 ---EITGPHSYE------AVLKHVHKYVPKPEHNP---FTSLIPQTGVKLTPKHYA--YL 174

Query: 162 ETHRGCLGHCTFCQVPEFFGRDIRSKPIELIIEEVNELKKNGVNRIAISGGTGSLYNFKN 221
           +   GC   CTFC +P   G D+ S+    +++E   L + GV  I +     S Y  K+
Sbjct: 175 KISEGCDNRCTFCIIPALRG-DLDSRGAGSVLDEAKRLVEAGVQEILVVSQDTSAYG-KD 232

Query: 222 TVNKNKFI------EMIESVSNIIGRQNLSVPDMRVDY------VDEEVLNAIKNYSIGW 269
              +  F       + I S++  +G+    V   R+ Y      VD+ +    +   + +
Sbjct: 233 KGGRTDFWNGMPVKQDITSLARQLGKMGAWV---RLHYIYPYPWVDDLIPLMAEGLILPY 289

Query: 270 VFYGIESGSDKLLNSMKKGTNSKKNLKAIELAKDC--GVKVAGSFIVGHPKEKEVDFLMT 327
           +   ++  S ++L  MK+     + L+AI+  ++    + +  +FIVG P E E DF M 
Sbjct: 290 LDIPMQHASPRILKMMKRPGRVDRQLEAIQRWREICPDLVIRSTFIVGFPGETEEDFEML 349

Query: 328 KDFIVDAELDDV 339
            DF+ +A LD V
Sbjct: 350 LDFLREARLDRV 361