Pairwise Alignments

Query, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis S2

Subject, 485 a.a., radical SAM/B12 binding domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 34/277 (12%)

Query: 97  DGVILGEGELTTPEIINGSKDG--------LAYFENGEM-----------IVNKPKSKPD 137
           D V+ GEGE   P ++   ++G        +AY  +G +           +   P    D
Sbjct: 121 DVVVRGEGEEVMPALLRVLEEGGDLATVPSIAYVRDGVVAETGGHAFVRDLSTLPLPARD 180

Query: 138 LDFSKIY----VPKDIAAQNVRG-ANVYIETHRGCLGHCTFCQVPEFFGRDIRSKPIELI 192
           L   ++Y     P     +   G    ++ + RGC+  CTFC   +  G  IR +PI+ +
Sbjct: 181 LTRKELYSFARTPNFSLYRTPEGKTEKHLFSSRGCVNRCTFCVAHKNIG--IRVRPIDSV 238

Query: 193 IEEVNELKKNGVNRIAISGGTGSLYNFKNTVNKNKFIEMIESVSNIIGRQNLSVPDMRVD 252
           I EV+ L +          G     +   T  K + IE+ +++ +          +  V+
Sbjct: 239 IGEVDLLLRE------YDAGYIFFCDSLFTSRKKRIIELSDALRHHFPGLRWGC-EAHVN 291

Query: 253 YVDEEVLNAIKNYSIGWVFYGIESGSDKLLNSMKKGTNSKKNLKAIELAKDCG-VKVAGS 311
            +DE+ + A+       + +GIESG D+LL ++ K   + +   AI + K    +   G 
Sbjct: 292 TIDEDSVRAMAAGGCVDMNFGIESGVDRLLTAVNKRQTTAQIADAIRMVKRVSRINAIGL 351

Query: 312 FIVGHPKEKEVDFLMTKDFIVDAELDDVFVSAAEPIP 348
           FI+G P E+  D   T DF     LD    S   P P
Sbjct: 352 FILGLPGERPEDSDATIDFACSLPLDMAQFSILTPYP 388