Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 253 a.a., undecaprenyl diphosphate synthase from Pseudomonas stutzeri RCH2

 Score =  162 bits (409), Expect = 8e-45
 Identities = 90/232 (38%), Positives = 130/232 (56%), Gaps = 4/232 (1%)

Query: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92
           P+HV IIMDGN R AK+       GH  G   V  VI+ C    +  +TL+AFS EN+ R
Sbjct: 13  PRHVAIIMDGNNRWAKRRLLPGVAGHKAGVDAVRAVIEVCADSGVEVLTLFAFSSENWQR 72

Query: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152
           P  EV  LM+LF       A   D  ++ IR+ +IG R      +Q A+   E+ T G  
Sbjct: 73  PADEVGALMELFLSALRREARKLD--ENGIRLRIIGDRARFHPELQAAMLEVEEITAGNH 130

Query: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212
            + +  A  YGGQ +I+ + + +A + + G ++  +I   L    L T ++P P  DL I
Sbjct: 131 RFVLQVAANYGGQWDILQAAQHLATEAQAGRLNPAEITPALFQSYLATGDMPLP--DLCI 188

Query: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYGK 264
           RT GE RISNFL WQ  Y+ELYF + YWP F+ V + +++ ++  R+RR+GK
Sbjct: 189 RTGGERRISNFLLWQLAYAELYFSDLYWPDFKHVAMRKALADFSTRQRRFGK 240