Pairwise Alignments

Query, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

Subject, 252 a.a., undecaprenyl pyrophosphate synthetase UppS from Phaeobacter inhibens DSM 17395

 Score =  164 bits (416), Expect = 1e-45
 Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 4/231 (1%)

Query: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92
           PKHV IIMDGN R A+  G     GH+ GA +V EV++ C +L +  +T++AFS EN+ R
Sbjct: 22  PKHVAIIMDGNGRWAQARGRPRLFGHHAGAKRVREVVECCPALGVKYLTIFAFSTENWKR 81

Query: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152
            + EV  LM LF R   +  +   + +  +RV  IG R  L + +   ++  E +T    
Sbjct: 82  TQVEVAGLMSLFRRYISK--EMKALSQRNVRVRFIGDRVRLDKKLVTLMDQLEQETACND 139

Query: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212
              +  A+ YG + E+  + K++A+ V  G +D  D++ E + + L T  LP  +PDL+I
Sbjct: 140 GTHLTIALNYGSRDEVARATKRLAEDVAAGRLDPADVDEETLPRYLDTHVLP--DPDLVI 197

Query: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263
           RTSGE RISNFL WQS Y+E  F +T WP F   ++ R  R Y +R+RR+G
Sbjct: 198 RTSGEARISNFLLWQSAYAEYEFIDTLWPDFTADEMDRLCRSYGQRDRRFG 248