Pairwise Alignments
Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2
Subject, 1213 a.a., Exonuclease SbcC from Pseudomonas fluorescens FW300-N2E2
Score = 65.5 bits (158), Expect = 2e-14
Identities = 156/931 (16%), Positives = 367/931 (39%), Gaps = 157/931 (16%)
Query: 22 SKGITSIIGQNGSGKSSIFQAMNFALF--APRGNNFRIE----------------NLMQQ 63
S G+ +I G G+GKS++ A+ ALF PR NN + L+++
Sbjct: 29 SAGLFAITGPTGAGKSTLLDALCLALFGAVPRLNNTGRDAKVPDVDGEIATGDPRTLLRR 88
Query: 64 GAASFSVELEFE-MMGNTYLVK--RKRFQHKTDDKLYV---------NGKLNAESASEIN 111
G E++F + G Y + R + K KL N +L A E
Sbjct: 89 GTGDGYAEVDFRGIDGRRYRARWEANRAREKAGGKLQASRQSLRDLDNDQLLASQKGEYK 148
Query: 112 KKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKY----EKASEKM 167
++E L ++ F+ A+ + Q E + ++ +R E++ KL Y +A +K
Sbjct: 149 TQLETALGLNFEQFTRAVLLAQSEFSAFLKADDNERSELLEKLTDTALYTRLGRRAFDKA 208
Query: 168 NIVKKSYEETLLKLEGELTQEPEI---------------------LENLEKLKNEVSESE 206
K+++++ + G PE L+ LE+ + +
Sbjct: 209 KHAKETHKQLQDQATGVTPLAPEARAELDQRFTEAQLQLKAQQAQLKQLEQQHTWLRDLG 268
Query: 207 ILKEEILKKYENL------------EKLKLEKNSEILQMEEKFAENNQLKENLKDIISEI 254
+L++E E L E+LKL + ++ +F +L L+ + ++I
Sbjct: 269 LLQDEHASAAEQLQQAQADWNALADERLKLVRLEQLAPQRHQFIRQTELNRQLEPLTAQI 328
Query: 255 KNINLEIQNFKNSLNLVAEES---KNISENEENYKKYLELELKIKELNNKLIGHKSNYES 311
+ + + ++L A+++ K + + ++ + + L + G +S
Sbjct: 329 QQLT------QQQIDLHAQQAELEKALDDAQQALASARQQSIDSAPLLRQAFGEQSTLAR 382
Query: 312 YNKLKTIEESLLKELGVLKESLKDNKKNPDELKENLKENDEKI-LILDKI---------- 360
+ + ++ +++ + ++ D L E ++ E++ I D +
Sbjct: 383 LAQDANLSAERQEQ---AQQACTEGQRTIDTLLEQQRQVAERLQRIADALEQSTHLAPLS 439
Query: 361 ------KEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENL 414
++++++L I ++ + + T+E + + EEL T++ E L
Sbjct: 440 DAWNAYRDRLQQLMLIGNRLNQGQAELATLE---------QSATRAAEELATRRQDLEVL 490
Query: 415 LKEKFDLEKKLQNETDEKTKLI----SELTDFEKIEEKINLENELKEKYEDLSEKIDKLN 470
KE + + + L+ +L FE + + EL ++ +L ++ +
Sbjct: 491 YKEAGAEPQAVAEQIQLLGTLLQDNRKQLRAFEDLTRLWASQQELDKRGAELEQRQQR-- 548
Query: 471 EIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITEEK--KQELLEKYNSEIQNEQLSTE 528
+ +++ + E +KAEL + + V + + ++ + E +E+ +++Q+EQ
Sbjct: 549 -ALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVEQLRAQLQDEQPC-- 605
Query: 529 SLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTEKLNELTGK 588
+ +E ++ E + L D + E +K L + E +I+ + + + +
Sbjct: 606 PVCGSVEHPYHQPEALLENLGRFDETE----EANARKAVDL-LNEKVIDLRTQYSGVIAQ 660
Query: 589 INEYSSLNDEISLIENKL-KNLENDYKNCNYSSQFLTKND-----------ESEFLTKKL 636
+ E ++++ + L +LE + +Q K D + ++
Sbjct: 661 LKELKQQQEQLASQQQSLAPSLEAHPLSAQLLAQDSNKRDTWLAQQNSQLHQHISQDEQR 720
Query: 637 ELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNLEREINLKKELKNIQNDIS--SKIGI 694
+ + + D++++ + + E + + N ++E L ++ + + +++S S +
Sbjct: 721 QTALLTLQQDAARLAQQLRDAETASQQAAQQLSNQQQE--LARDRQRLDDELSHFSALLP 778
Query: 695 VECYVKWETEKS----DFENKLSECKENYEKYMESLAVLKNYSKTYSVEINNLNEFLNQ- 749
+ TE + + ++++ E E+ + L+ +T E + L Q
Sbjct: 779 ADTLQALRTEPAATFMQLDQQIAQRLEQLEQQRDELSEQLQRQQTLEKEQDRQQTRLQQL 838
Query: 750 --------KIAEKQQFCE----KLLETRTEIEKNIQTVNYNPELHENAKRLYENILNEFN 797
++E+QQ C+ +LL T E+ Q ++ E +A+ L +
Sbjct: 839 EAVRLQFSALSEQQQACQQQLTQLLGEHTSAEQWQQQLDQRLEQTRDAEATANQQLQQLR 898
Query: 798 DILRTLERISSELKLKNENISYLNEKIQNLS 828
+ L ++++ELK + E L+ + Q L+
Sbjct: 899 N---DLVQLAAELKARQEQARSLDLERQALA 926
Score = 48.9 bits (115), Expect = 2e-09
Identities = 120/688 (17%), Positives = 277/688 (40%), Gaps = 124/688 (18%)
Query: 320 ESLLKELGVLKESLKDNKKNPDELKENLKENDEKILILDKIKEKIKELEFIEKQIYEIKI 379
E+LL+ LG E+ + N + +L N++ I + + I +L+ +++Q ++
Sbjct: 619 EALLENLGRFDETEEANARKAVDLL-----NEKVIDLRTQYSGVIAQLKELKQQQEQLAS 673
Query: 380 HKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKFDLEKKLQNETDEKTKLISEL 439
+ ++L S++ + S + + K++++ L ++ L + + + +T L++
Sbjct: 674 QQ---QSLAPSLEAHPLSAQLLAQDSNKRDTW--LAQQNSQLHQHISQDEQRQTALLTLQ 728
Query: 440 TDFEKIEEKI-NLENELKEKYEDLSEKIDKLNEIVLKKESKISEYKN----SKAELEKTK 494
D ++ +++ + E ++ + LS + +L + + ++S + + +T+
Sbjct: 729 QDAARLAQQLRDAETASQQAAQQLSNQQQELARDRQRLDDELSHFSALLPADTLQALRTE 788
Query: 495 DSCHVCQSKITEEKKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSF 554
+ Q ++ E LE+ E+ + ++L+K+ +++ + +L ++++
Sbjct: 789 PAATFMQLDQQIAQRLEQLEQQRDELSEQLQRQQTLEKE-------QDRQQTRLQQLEAV 841
Query: 555 KLKYGELKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYK 614
+L ++S+L+++ + +L L ++
Sbjct: 842 RL----------------------------------QFSALSEQQQACQQQLTQLLGEHT 867
Query: 615 NCNYSSQFLTKNDESEFLTKKLELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNLERE 674
+ Q L + +LE ++ D+ N++ L+ L+++L
Sbjct: 868 SAEQWQQQLDQ---------RLEQTR-----DAEATANQQ--LQQLRNDL---------- 901
Query: 675 INLKKELKNIQNDISS----KIGIVECYVKWETEKSDFENKLSECKENYEKYMESLAVLK 730
+ L ELK Q S + + +W T + ++ +E+L L
Sbjct: 902 VQLAAELKARQEQARSLDLERQALAAGIAQWRTSHPELDDAA----------LEALLGLD 951
Query: 731 NYSKTYSVEINNLNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYE 790
+ + L Q++ ++ E+ TE E+ +Q N + N L E
Sbjct: 952 DQHVSQ----------LRQRLLNSEKAIEQARVLLTEREQRLQ----NHQAQHNGNLLPE 997
Query: 791 NI---LNEFNDILRTLERISSELKLKNENISYLNEKIQNLSNKKEEKKKIEEFKEYLDKI 847
+ L E E+ +EL+ + Q L+ + E+ + LD +
Sbjct: 998 QLAEALTELQGQFAASEQRCAELRAEQAEDQRRQNANQALAQQIEQAYIEYQRWARLDAL 1057
Query: 848 KREIFSKDGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIV------DGL- 900
+ D F+K + + L+ H N ++ Y + L+V D L
Sbjct: 1058 IGSA-TGDRFRKLAQAYNLDLLVHHANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELR 1116
Query: 901 PVETLSGGEQIAVSLALRLGISKAVCN--NIECIILDEPTAYLDEDRRKNLLNIFKNIKT 958
V +LSGGE VSLAL LG++ + IE + +DE LD + + ++ ++
Sbjct: 1117 SVHSLSGGETFLVSLALALGLASMASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQA 1176
Query: 959 I-NQMAIITHHQELEQIADNIVKVRKIG 985
++A+I+H QE+ + ++VR+ G
Sbjct: 1177 QGRKVAVISHVQEMHERIPVQIQVRRQG 1204