Pairwise Alignments

Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 1162 a.a., Chromosome partition protein smc from Pseudomonas fluorescens FW300-N2E2

 Score = 65.1 bits (157), Expect = 3e-14
 Identities = 67/294 (22%), Positives = 135/294 (45%), Gaps = 35/294 (11%)

Query: 3   IKNIKMENFRSHRN-TSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL- 60
           +K IK+  F+S  + T++NF   + +++G NG GKS+I  A+ + +      N R E++ 
Sbjct: 3   LKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMT 62

Query: 61  --------MQQGAASFSVELEFEMMGNTYLVK---------RKRFQHKTDDKLYVNG-KL 102
                    ++  +  S+EL F+    T + +         R++    + +  ++NG K 
Sbjct: 63  DVIFNGSTSRKPVSQASIELLFDNSDGTLVGEYAAYAEISIRRKVTRDSQNSYFLNGTKC 122

Query: 103 NAESASEINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKY-E 161
                ++I       L       S +I I+QG I+ LI+  P D +  I +  GI KY E
Sbjct: 123 RRRDITDI------FLGTGLGPRSYSI-IEQGMISKLIEAKPEDLRNFIEEAAGISKYKE 175

Query: 162 KASEKMNIVKKSYEE--TLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENL 219
           +  E  N +++++E    L  L  EL ++   LE L +      + +  K E  +    L
Sbjct: 176 RRRETENRIRRTHENLARLTDLREELERQ---LERLHRQAEAAKKYQEYKGEERQLKAQL 232

Query: 220 EKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAE 273
             L+ +  +E +   E    N ++  + + +++E +N +  I+  ++  + ++E
Sbjct: 233 SALRWQALNEQVGQREAIIGNQEV--SFEALVAEQRNADAAIERLRDGHHDLSE 284



 Score = 42.7 bits (99), Expect = 1e-07
 Identities = 94/520 (18%), Positives = 200/520 (38%), Gaps = 56/520 (10%)

Query: 482  EYKNSKAELEKTKDSCHVCQSKITEEKKQELLEKYNSE-----IQNEQLSTESLKKQLEI 536
            E +   AE E+ + S    ++++   + Q+  ++   E     +Q+E      LK QL  
Sbjct: 655  EIQRLGAEREEREASVEALETELQNLRAQQRQQENGREHLRRLLQDEARQQGELKAQLSA 714

Query: 537  ILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLN 596
               K E++ ++   ++    + GE +  ++   ++ E+ ++  E L+ +     +   L 
Sbjct: 715  GKAKVEQLALRRTRLEEEIAELGEQRALEHE--QIGEARLQLQEALDAMALDTEQRELLL 772

Query: 597  DEISLIENKLKNLENDYKNCNYSSQFLTKNDESEFLTKKLELSKIIGDYDSSKIENEKKS 656
             +   +  +L  +  + +            D +  L  +L   K   D     +E  +  
Sbjct: 773  AQRDSLRERLDRVRQEARQ---------HKDHAHQLAVRLGSLKAQHDSTRQALERLEMQ 823

Query: 657  LENLKDELKNTIYNLER-EINLKKELKNIQNDISSKIGIVECYVKWETEKSDFENKLSEC 715
             E L ++ +    NLE  E  L++    ++  +  ++ + E     +    D + +L + 
Sbjct: 824  SERLTEKREQLSLNLEEGEAPLEELRLKLEELLDKRMSVDEELKTAQIALEDADRELRDA 883

Query: 716  KENYEKYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTV 775
            ++   +  +   +++   +   +E   L          ++   ++LLE   +++  + T+
Sbjct: 884  EKRRSQAEQQSQLIRGQMEQQRMEWQALT-------VRRKALQDQLLEDGYDLDGVLATL 936

Query: 776  NYNPELHENAKRLYENILNEFNDILRTLERISSELKLKNENISYLN-------EKIQNLS 828
                   ++A+   E I      +         E + ++E   YL+       E ++ L 
Sbjct: 937  VAGAN-EKDAEEELERIAQRIQRLGAINLAAIDEYQQQSERKRYLDAQNDDLVEALETLE 995

Query: 829  N--KKEEKKKIEEFKEYLDKIK---REIFSK--DGFQKYLREKYIPLIQRHTNQIFQEFE 881
            N  +K +K+    FK+  D+I    + +F K   G   YL      L+      + +   
Sbjct: 996  NVIRKIDKETRNRFKDTFDQINGGLQALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPG 1055

Query: 882  LPYSHIQLKDDYSLIVDGLPVETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYL 941
               S I L               LSGGE+   +LAL   I K   N     +LDE  A L
Sbjct: 1056 KKNSTIHL---------------LSGGEKALTALALVFAIFKL--NPAPFCMLDEVDAPL 1098

Query: 942  DEDRRKNLLNIFKNIKTINQMAIITHHQELEQIADNIVKV 981
            D+        + K +    Q   ITH++   ++AD ++ V
Sbjct: 1099 DDANVGRYARLVKEMSETVQFIYITHNKIAMEMADQLMGV 1138