Pairwise Alignments
Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2
Subject, 1217 a.a., hypothetical protein from Pseudomonas stutzeri RCH2
Score = 57.0 bits (136), Expect = 8e-12
Identities = 122/604 (20%), Positives = 245/604 (40%), Gaps = 89/604 (14%)
Query: 22 SKGITSIIGQNGSGKSSIFQAMNFALF--APR------------------GNNFRIENLM 61
S G+ +I G G+GKS+I A+ ALF PR G + R NL+
Sbjct: 29 SAGLFAITGPTGAGKSTILDALCLALFGSTPRLDSVSPLNKVPDVEAEIGGGDER--NLL 86
Query: 62 QQGAASFSVELEF-EMMGNTYLVK--RKRFQHKTDDKLYVNGK----------LNAESAS 108
++G + E++F + G+ Y + KR + K D +L + + L +
Sbjct: 87 RRGCGAGFAEVDFVGVDGHRYRARWEVKRAREKVDGRLQASSQSLTDLDSGTLLASGKKR 146
Query: 109 EINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMN 168
E + +E L + + F+ A+ + Q E + ++ +R ++ KL Y + +
Sbjct: 147 EFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKADDNERGTLLEKLTDTGLYSRLGQAAF 206
Query: 169 IVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESE--ILKEEILKKYENLEKLKLEK 226
K +E+L +LE Q+ L+ LE + +V E E EE+ K + L++L+ ++
Sbjct: 207 EAAKQAKESLTRLE----QQAGGLQPLEPEQRDVLEREHQAQLEELKKLQQQLKELEAQR 262
Query: 227 N--SEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNISENEEN 284
SE+ ++E E ++ L+D E +++ + + + + ++
Sbjct: 263 QWLSELQRLEN---EREAARQQLQDAEDERESL--------TAARRILDLFELLAPQRHR 311
Query: 285 YKKYLELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKNPDELK 344
+ + ELE L+G + ES +L+ +SL + L L+ + + +
Sbjct: 312 FLRQQELE--------PLLGKAA--ESLTRLQHEAQSLQQRLDSLQRQCEAAGNDLRAAE 361
Query: 345 ENLKENDEKILILDKIKEKIKELEFIEKQIYE--------IKIHKKTVETLFDSVKIYDD 396
+ + + ++ + +E++ L I E + T++ L D + +
Sbjct: 362 QARQTAEPRLAQARREEERLSHLNADLASIREESAQADAAASAGEATLKQLGDQQQRAAE 421
Query: 397 SIKTF-EELKTKK---------NSYENLLKEKFDLEKKLQNETDEKTKLISELTDFEKIE 446
+ T ++L+T Y L++ L +LQ E L ++ E E
Sbjct: 422 QLATLTQQLETSAALQPLCVAWGGYRPRLQQAVQLAARLQQGQSELPALQAQA---EAAE 478
Query: 447 EKINLENELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITE 506
+ +L E + + + L E + ++ E++ ++ E + + + ++T
Sbjct: 479 SQQSLAREALDNLQRERDSELGLAEQLAGLHRQLDEWRQAERETDALQ---QLWAQQLTL 535
Query: 507 EKKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEK-MKVKLNEIDSFKLKYGELKEKK 565
Q L NS Q E S L KQ+ + E+ +KV L ++ +L E E
Sbjct: 536 TASQHELSNANSRQQAELDSLVPLGKQVRNDRDAAEQALKVTLALLERQRLARSENVEAL 595
Query: 566 NYSL 569
SL
Sbjct: 596 RASL 599
Score = 42.4 bits (98), Expect = 2e-07
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 846 KIKREIFSKDG--FQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIV------ 897
+I I S DG F+K + + L+ +H N ++ Y + L+V
Sbjct: 1053 RIAALIGSSDGGAFRKIAQAYNLDLLVQHANVQLRQLARRYRLKRGGSPLGLLVLDTEMG 1112
Query: 898 DGL-PVETLSGGEQIAVSLALRLGISKAVCN--NIECIILDEPTAYLDEDRRKNLLNIFK 954
D L V +LSGGE VSLAL LG++ + IE + +DE LD + + ++
Sbjct: 1113 DELRSVHSLSGGETFLVSLALALGLASMASSKLKIESLFIDEGFGSLDPESLQIAMDALD 1172
Query: 955 NIKTI-NQMAIITHHQELEQIADNIVKVRKIG 985
+++ ++A+I+H E+ + ++VR+ G
Sbjct: 1173 SLQAQGRKVAVISHVAEMHERIPVQIRVRRQG 1204
Score = 33.5 bits (75), Expect = 9e-05
Identities = 40/202 (19%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 425 LQNETDEKTKLISELTD---FEKI-EEKINLENELKEKYEDLSEKIDKLNEIVLKKESKI 480
L+ + +E+ L+ +LTD + ++ + + KE L ++ L L+ E +
Sbjct: 178 LKADDNERGTLLEKLTDTGLYSRLGQAAFEAAKQAKESLTRLEQQAGGLQP--LEPEQRD 235
Query: 481 SEYKNSKAELEKTKDSCHVCQSKITEEKKQ-ELLEKYNSEIQNEQLSTESLKKQLEIILN 539
+ +A+LE+ K K+ ++ K+ E ++ SE+Q + E+ ++QL+ +
Sbjct: 236 VLEREHQAQLEELK--------KLQQQLKELEAQRQWLSELQRLENEREAARQQLQDAED 287
Query: 540 KKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEI 599
++E + +D F+L L +++ L+ +E + LT +E SL +
Sbjct: 288 ERESLTAARRILDLFEL----LAPQRHRFLRQQELEPLLGKAAESLTRLQHEAQSLQQRL 343
Query: 600 SLIENKLKNLENDYKNCNYSSQ 621
++ + + ND + + Q
Sbjct: 344 DSLQRQCEAAGNDLRAAEQARQ 365