Pairwise Alignments
Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2
Subject, 1162 a.a., condensin subunit Smc from Pseudomonas syringae pv. syringae B728a
Score = 67.4 bits (163), Expect = 5e-15
Identities = 179/937 (19%), Positives = 391/937 (41%), Gaps = 172/937 (18%)
Query: 1 MIIKNIKMENFRSHRN-TSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIEN 59
M +K IK+ F+S + T++NF + +++G NG GKS+I A+ + + N R E+
Sbjct: 1 MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60
Query: 60 L---------MQQGAASFSVELEFEMMGNTYLVK---------RKRFQHKTDDKLYVNG- 100
+ ++ + S+EL F+ T + + R++ + + Y+NG
Sbjct: 61 MTDVIFNGSTSRKPVSQASIELVFDNSDGTLVGEYAAYAEISIRRKVTRDSQNSYYLNGT 120
Query: 101 KLNAESASEINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKY 160
K ++I L S +I I+QG I+ LI+ P D + I + GI KY
Sbjct: 121 KCRRRDITDI------FLGTGLGPRSYSI-IEQGMISKLIEAKPEDLRNFIEEAAGISKY 173
Query: 161 -EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENL 219
E+ E N +++++ ENL +L + L+EE+ ++ E L
Sbjct: 174 KERRRETENRIRRTH------------------ENLARLTD-------LREELERQLERL 208
Query: 220 EKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNIS 279
+ + + +E AE QLK L + + N +LV + IS
Sbjct: 209 HR----QAQAAEKYQEYKAEERQLKAQLSALRWQALN------------DLVGQREAVIS 252
Query: 280 ENEENYKKYL----ELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKD 335
E ++ + + I+ L + GH E +N ++ S+ ++ +++S++
Sbjct: 253 NQEVGFEALVADQRSADASIERLRD---GHHDLSERFNLVQGRFYSVGGDIARVEQSIQH 309
Query: 336 NKKNPDELKENLKEND-----------EKILILDKIKEKIKELEFIEKQIYEIKIHKKTV 384
++ +L+++L+E + +L + E+++ LE E+++ + +
Sbjct: 310 GQQRLRQLQDDLREAERARQETESHLGHDTTLLATLGEELEMLE-PEQEMTSAAAEESAI 368
Query: 385 --ETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKF-DLEKKLQNETDEKTKLISELTD 441
E +++ + + F + + + + + LE+ ++ + + +L E
Sbjct: 369 ALEDAEAAMQGWQEKWDVFNQQSAEPQRQAQVQQSRIQQLEQSIERLAERQRRLAEERQL 428
Query: 442 FEKIEEKINLENELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQ 501
E + + + EDL+ + L E+ + +E + + + L+ H Q
Sbjct: 429 LAADPE----DAAILQLSEDLATRDMTLEELHMGEEQAVERLEQLREALQ------HASQ 478
Query: 502 SKITEEKKQELLEKYNSEIQN----EQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLK 557
+ +++ Q L++ N + + +Q + + E + +++ + +L E S +
Sbjct: 479 A---QQQAQGELQRLNGRLASLEALQQAALDPDTGTAEWLRDQQLAERPRLAEGLSVEAG 535
Query: 558 YGELKEKKNYSLKVEESIIETTEKL---NELTGKINEYSSLNDEISLIENKLKNLENDYK 614
+ EL + ++ +++ + L N G + S+ D I + L+ +++
Sbjct: 536 W-ELAVETVLGADLQAVLVDDFDGLDLANFEQGDLRLLSAGADTIRAPGSLLEKVDSTVD 594
Query: 615 NCNYSSQFLTKNDESEFLTKKLELS--------------------KIIGDYDSSKI---- 650
+ Q + + E L ++ +LS + + S +
Sbjct: 595 LSAWLGQVIPVENLDEALARRAQLSAGQSLISRDGYWVGRHFLRVRRASEAQSGVLARGQ 654
Query: 651 ENEKKSLENLKDELKNTIYNLEREINLKKELKNIQNDISSKIGIVECYVKWET-EKSDFE 709
E ++ SLE +DE + T+ LE ++ + +E ++ Q D ++ V+ ET ++S+ +
Sbjct: 655 ELQRLSLE--RDEREATLATLEEQLLVLREQQSQQEDAREQL---RRRVQDETRQQSELK 709
Query: 710 NKLSECKENYEKYM-------ESLAVLKNYSKTYSVEINNLNEFLNQ------KIAEKQQ 756
+LS + E+ E LA L + +VE +L E Q +A+ +
Sbjct: 710 AQLSAVRVKVEQLTLRRTRLDEELAEL---GEQRAVEHEHLGESRLQLQDALDSMAQDTE 766
Query: 757 FCEKLLETRTEIEKNIQTVNYNPELHEN-----AKRLYENILNEFNDILRTLERISSELK 811
E L R + + + + + H++ A RL +I +++ + LER L+
Sbjct: 767 QREVLQAQRDALRERLDRIRQDARQHKDHSHQLAVRL-GSIKAQYDSTRQALER----LR 821
Query: 812 LKNENISYLNEKIQNLS-NKKEEKKKIEEFKEYLDKI 847
+++E L EK + LS N +E + +EE + L+++
Sbjct: 822 MQSER---LTEKREQLSLNLEEGEAPLEELRLKLEEL 855
Score = 52.8 bits (125), Expect = 1e-10
Identities = 98/494 (19%), Positives = 194/494 (39%), Gaps = 57/494 (11%)
Query: 506 EEKKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKK 565
+ ++++ E+ +Q+E LK QL + K E++ ++ +D + GE + +
Sbjct: 684 QSQQEDAREQLRRRVQDETRQQSELKAQLSAVRVKVEQLTLRRTRLDEELAELGEQRAVE 743
Query: 566 NYSLKVEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSSQFLTK 625
+ L ES ++ + L+ + + L + + +L + D +
Sbjct: 744 HEHLG--ESRLQLQDALDSMAQDTEQREVLQAQRDALRERLDRIRQDARQ---------H 792
Query: 626 NDESEFLTKKLELSKIIGDYDSSK--IENEKKSLENLKDELKNTIYNLEREINLKKELKN 683
D S L + L I YDS++ +E + E L ++ + NLE +EL+
Sbjct: 793 KDHSHQLA--VRLGSIKAQYDSTRQALERLRMQSERLTEKREQLSLNLEEGEAPLEELRL 850
Query: 684 IQNDISSKIGIVECYVKW-ETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYSVEINN 742
++ + +V+ ++ + D + +L E ++ + + +L+ + +E
Sbjct: 851 KLEELLERRMVVDDEMRIAKNALEDADRELREAEKRRTQAEQQSQLLRGQLEQQRLEWQA 910
Query: 743 LNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTVNYNPELHENA-KRLYENILNEFNDILR 801
L ++ ++L E ++ + T+ PE E A ++ E+I +
Sbjct: 911 LT-------VRRKALQDQLHEDGYDLHGVLATLT--PEASEQAAEQQLESIAGRIQRLGA 961
Query: 802 TLERISSELKLKNENISYLN-------EKIQNLSN--KKEEKKKIEEFKEYLDKIK---R 849
E + ++E YL+ E + L N +K +K+ FK+ D+I +
Sbjct: 962 INLAAIDEYQQQSERKRYLDAQDADLVEALDTLENVIRKIDKETRNRFKDTFDQINSGIQ 1021
Query: 850 EIFSK--DGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGLPVETLSG 907
+F K G YL L+ + + S I L LSG
Sbjct: 1022 ALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGKKNSTIHL---------------LSG 1066
Query: 908 GEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTINQMAIITH 967
GE+ +LAL I K N +LDE A LD+ + K + Q ITH
Sbjct: 1067 GEKALTALALVFAIFKL--NPAPFCMLDEVDAPLDDANVGRYARLVKEMSQTVQFIYITH 1124
Query: 968 HQELEQIADNIVKV 981
++ ++AD ++ V
Sbjct: 1125 NKIAMEMADQLMGV 1138
Score = 27.3 bits (59), Expect = 0.006
Identities = 34/180 (18%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 220 EKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNIS 279
E+L ++ L +EE A +L+ L++++ ++ E++ KN+L E +
Sbjct: 825 ERLTEKREQLSLNLEEGEAPLEELRLKLEELLERRMVVDDEMRIAKNALEDADRELREAE 884
Query: 280 EN---------------EENYKKYLELELKIKELNNKLIGHKSNYESYNKLKTI------ 318
+ E+ ++ L ++ K L ++L H+ Y+ + L T+
Sbjct: 885 KRRTQAEQQSQLLRGQLEQQRLEWQALTVRRKALQDQL--HEDGYDLHGVLATLTPEASE 942
Query: 319 ---EESL------LKELGVLKESLKDNKKNPDELKENLKENDEKIL-ILDKIKEKIKELE 368
E+ L ++ LG + + D + E K L D ++ LD ++ I++++
Sbjct: 943 QAAEQQLESIAGRIQRLGAINLAAIDEYQQQSERKRYLDAQDADLVEALDTLENVIRKID 1002