Pairwise Alignments

Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 922 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  152 bits (384), Expect = 1e-40
 Identities = 185/1016 (18%), Positives = 434/1016 (42%), Gaps = 130/1016 (12%)

Query: 1   MIIKNIKMENFRSHRNTSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL 60
           M I+++ + NF++H   +  F  G+ +I G+NG+GK+SI +A+ + LF    + +R E L
Sbjct: 1   MEIRSVSLRNFKTHAEAAFEFRLGVNAICGENGAGKTSILEAIAWTLF-DFDSGYRKEEL 59

Query: 61  MQQGAASFSVELEFEMM--GNTYLVKRKRFQHKTDDKLYVNGKLNAESASEINKKIEEIL 118
            +QG ++ SV +       G  Y V+R+ F+++ D     + +L  +  +  N     + 
Sbjct: 60  RRQGESNTSVTVGLVSARDGRYYEVQRRSFKNRPDSYQIYDPELGLKLDNLENVSAARLW 119

Query: 119 EIDN----------SVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEK-- 166
             D+           +F+  I I QG        TP DR+ +   +LG+E Y  A  +  
Sbjct: 120 LCDHLGFRAGMDLSRLFAEVIGIPQGTFTADFLKTPSDRRRIFDPILGLESYRDAHRQSI 179

Query: 167 -MNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENLEKLKLE 225
            +    +  ++ + +    L+ E   L  LE+   E+S+S   +  +L++ +   +  L 
Sbjct: 180 DLQRYAEGQQQAIAQQVAILSAEVADLPTLEQQLQEISQSLEQQRSLLRQRQQARQQALT 239

Query: 226 KNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKN--SLNLVAEESKNISENEE 283
              +I Q  ++  +  Q ++ L     E++   LE Q      S +      + +  + E
Sbjct: 240 HLQQIKQQAQQQQQRQQQRQQL-----EVQRQALEQQQQAQARSRDEAIAAQQILGASRE 294

Query: 284 NYKKYLELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKNPDEL 343
            +++Y  L  +I+ LN +L   +   +   +L   ++ L                  ++L
Sbjct: 295 GWQRYQSLTEQIQALNGQL---RQREQGRRQLSQWQQQL------------------NQL 333

Query: 344 KENLKENDEKILILDKIKEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEE 403
           +E     ++++ +         + ++ ++QI + +   +  E L  +++      +   +
Sbjct: 334 RETAAGLEQQVAL---------QADW-QRQIEQRQPDLQQQEQLEAALRQQQQQQQALSQ 383

Query: 404 LKTKKNSYENLLKEKFDLEKKLQNETDEKTKLISELTDFEKIEEKINLENELKEKYEDLS 463
           L+ +++  +  LK     ++ LQ    E   L  +L +  + + +I       E+ +   
Sbjct: 384 LEQRRHWLQQRLKAIATEQQSLQQRLSELQGLAVQLAELPRCQAEI-------EQLQARL 436

Query: 464 EKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITEEKKQELLEKYNSEIQNE 523
            + D L  +   + +++  +  + A+ ++      V  ++   +  Q  L  Y + +   
Sbjct: 437 ARADTLGNLAQDRRTQLETFTAAIAQHQQA-----VTAAQAQLQDLQTALPLYQTHLAQV 491

Query: 524 QLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTEKLN 583
             + E   + L   L+ ++    +L   D   L   +L++++           +T  +L 
Sbjct: 492 GETLEQGLQLLASQLDDQQAFFAQLGGGDRIALSQ-QLQQQQ-----------QTLAQLR 539

Query: 584 ELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSSQFLTKNDESEFLTKKLELSKIIG 643
            L  ++ + + L  ++  ++ + ++LE + +  +           +E       ++ I  
Sbjct: 540 ALEKQVEQQTLLEQQLQKLQTEQQSLEQERRQLS-----------TELQAAPAVITAI-- 586

Query: 644 DYDSSKIENEKKSLENLKDELKNTIYNLEREINLKKELKN-------IQNDISSKIGIVE 696
               ++ E+E ++L + + EL+     L+    +  EL+        +Q  I      +E
Sbjct: 587 ----AQTESELQALGDPRRELQLLRSQLQASAKVVSELQQNQAQQAQLQPQIQPLRDRLE 642

Query: 697 CYVKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKQQ 756
              + E + +  E    +  E+Y +Y+++                ++++ L ++ A+ QQ
Sbjct: 643 ALAELEEQLNQAEQARQQAAEDYRRYLQA---------------ESISQQLPEREAQLQQ 687

Query: 757 FCEKLLETRTEIEKNIQTVNYNPELH----ENAKRLYENILNEFNDILRTLERISSELKL 812
             E+L + + + +   + +   P L       A++ ++ +  E   +   L  +  E + 
Sbjct: 688 TSEQLAQLQAQWQLLQEAIAAEPALDLAILSAAEQTWQALEGECQRLTGALPGLEQEQQR 747

Query: 813 KNENISYLNEKIQNLSNKKEEKKKIEEFKEYLDKIKREIFSKDGFQKYLREKYIPLIQRH 872
               I       Q L+ ++++ ++ +   ++++  +R I+++ G +  L   +I  I R 
Sbjct: 748 LQTEIGRRQAAAQTLAEQQQQLEQHQAIGQFIETARR-IYNQSGPR--LSRYFIGEISRE 804

Query: 873 TNQIFQEF-ELPYSHIQLKDDYSLIVDGL----PVETLSGGEQIAVSLALRLGISKAVCN 927
            +++++E    P   +   +DY + V         +TLSGGEQ+  +LA+RL + + +  
Sbjct: 805 GDRLYRELLARPGVALDWTEDYEIRVQESGRWRSFKTLSGGEQMCAALAVRLALLRVI-G 863

Query: 928 NIECIILDEPTAYLDEDRRKNLLNIFKNIKTINQMAIITHHQELEQIADNIVKVRK 983
                  DEPT  +D  RR+ L +   N+++  Q+ +I+H    E + +NIV+V +
Sbjct: 864 QCPIAFFDEPTTNMDLQRRRQLADAIGNLQSFRQLFVISHDDTFEHLTENIVRVER 919