Pairwise Alignments

Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 1044 a.a., exonuclease subunit SbcC from Klebsiella michiganensis M5al

 Score = 63.5 bits (153), Expect = 7e-14
 Identities = 62/286 (21%), Positives = 132/286 (46%), Gaps = 31/286 (10%)

Query: 1   MIIKNIKMENFRSHRNT-SINFS------KGITSIIGQNGSGKSSIFQAMNFALF--APR 51
           M I +++++N  S +    I+FS       G+ +I G  G+GK+++  A+  AL+   PR
Sbjct: 1   MKILSLRLKNLNSLKGEWKIDFSAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60

Query: 52  GNNFRIE--NLMQQGAASFSVELEFEMMGNTYLV--KRKRFQHKTDDKLYV--------- 98
            ++      +LM +  A    E+EFE+ G  Y     + R +++ D  L V         
Sbjct: 61  LSSVSQSQNDLMTRDTAECLAEVEFEVKGIAYRAFWSQNRARNQPDGNLQVPRVELARCE 120

Query: 99  NGKLNAESASEINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIE 158
           +GK+ A+   +  +    +  +D   F+ ++ + QG+ A  +   P++R E++ +L G E
Sbjct: 121 DGKILADKVKDKLELTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180

Query: 159 KYEKASEKMNIVKKSYEETLLKLEGELT--------QEPEILENLEKLKNEVSESEILKE 210
            Y + S ++    K     L K++ + +        Q+  + ++L+ L +E  + ++ ++
Sbjct: 181 IYGQISAQVFEKHKQARVELEKIQAQASGVLLLSEEQQQALQQSLQALTSE-EKQQVSEQ 239

Query: 211 EILKKYENLEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKN 256
             L+     +  + E  +E L+ +    E     E  +  +S + N
Sbjct: 240 TRLQNARQWQIRREELTAEDLRAQTALREAQSALEQAQPQLSALLN 285



 Score = 44.7 bits (104), Expect = 3e-08
 Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 40/271 (14%)

Query: 752  AEKQQFCEKLL--ETRTEIEKNIQTV-NYNPELHENAKRLYENILNEFN------DILRT 802
            A++Q F   LL  ETR  +E+  QT+ N   +    A R  E ++N         DI + 
Sbjct: 761  ADRQAFLAALLDEETRQRLERLKQTLENALQQNQALALRAREALVNHSQQPPADADIGQP 820

Query: 803  LERISSELK----LKNENISYLNEKIQNLSNKKEEKKKIEEFKEYLDKIKRE-------- 850
             E +  +L+    L  EN +   E  Q L    E +++ +  +  +++  +E        
Sbjct: 821  PEELQDKLQQLTSLLRENSARQGEIRQQLKQNAENQQRQQLLRLQMERAAQEVEDWGWLN 880

Query: 851  --IFSKDG--FQKYLR----EKYIPLIQRHTNQIFQEFELPYS-----HIQLKDDYSLIV 897
              I S++G  F+K+ +    +  + L     N++   + L         +++ D +    
Sbjct: 881  SLIGSREGDKFRKFAQGLTLDNLVWLANHQLNRLHGRYLLQRKASDALELEVVDTWQ--A 938

Query: 898  DGL-PVETLSGGEQIAVSLALRLGISKAVCN--NIECIILDEPTAYLDEDRRKNLLNIFK 954
            D +    TLSGGE   VSLAL L +S  V +   I+ + LDE    LD +     L+   
Sbjct: 939  DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 998

Query: 955  NIKTINQ-MAIITHHQELEQIADNIVKVRKI 984
             +    + + +I+H + +++     +KV+KI
Sbjct: 999  ALNASGKIIGVISHVEAMKERIPVQIKVKKI 1029