Pairwise Alignments
Query, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2
Subject, 1142 a.a., chromosome segregation protein SMC (RefSeq) from Shewanella sp. ANA-3
Score = 66.6 bits (161), Expect = 9e-15
Identities = 164/881 (18%), Positives = 356/881 (40%), Gaps = 123/881 (13%)
Query: 1 MIIKNIKMENFRSHRN-TSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIEN 59
M +K IK+ F+S + T I F + +++IIG NG GKS++ A+ + L + R ++
Sbjct: 1 MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS 60
Query: 60 L---------MQQGAASFSVELEFEMMGNTYLVKRKRFQHKTDDKLYVNGKLNAESASEI 110
+ ++ + VEL FE R Q+ + +++ V +++ + S
Sbjct: 61 MSDVIFNGSSARKPVSVAGVELVFENKEG-----RLAGQYASYEEISVKRQVSRDGESWY 115
Query: 111 --------NKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKY-E 161
K I ++ + I+QG I+ LI+ P+D + I + GI +Y E
Sbjct: 116 FLNGQKCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKE 175
Query: 162 KASEKMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEILKEEILKKYENLEK 221
+ E N ++ + E L+ G++ E+ + LEKL + + K+Y L++
Sbjct: 176 RRRETENRIRHTREN--LERLGDI--RSELAKQLEKLSQQAKAA--------KQYRELKQ 223
Query: 222 LKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQNFKNSLNLVAEESKNISEN 281
+ + ++E+L M + +L+ + + +I ++ L+ A+ E
Sbjct: 224 AERKTHAELLVMRYQ-----ELQSQMASLSEQISSLELQ--------QAAAQSLAQTGEL 270
Query: 282 EENYKKYLELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKNPD 341
E EL+LK+ +L + + E+Y T E+ L++ L+ K+
Sbjct: 271 EST-----ELQLKLSQLAEQ---EQQAVEAYYLTGT-------EIAKLEQQLQSQKQRDA 315
Query: 342 ELKENLKENDEKILILD-KIKEKIKELEFIEKQIYEIKIHKKTVETLFDSVKI-YDDSIK 399
+L L++ E+I+ K+ + +E ++ ++ + + + D ++ ++ S+
Sbjct: 316 QLHNQLEQLSEQIIQNQAKLAAYQASFQALEAELSQLAPQHELQQEMMDELQAQWEMSVS 375
Query: 400 TFE-ELKTKKNSYENLLKEKFDLE---KKLQNETD---EKTKLISELTDFEKIEEKINLE 452
E + ++ + + + K LE KL ++ KT+L E+ +E +L
Sbjct: 376 RSEAQSESARVLAAAVAQHKLQLELHRSKLAHQQQLNAHKTQLHQ-----EQQQELASLN 430
Query: 453 -NELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSC-----HVCQSKITE 506
+ L++ L+++I +L + + ++ ++++ A + T D + Q +
Sbjct: 431 AHALEDNSASLNDEITQLEQALAEQVEINQGFESTLAAVTHTLDVARGEFEQLSQRLTSM 490
Query: 507 EKKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGELKEKKN 566
+ EL+E++ ++ Q E L + +++ + ++ L + L G +
Sbjct: 491 RARFELVEQWLAK-QEELSDKPQLWQSIQVENGWEAAAELALQGL--MTLPVGVNANEIG 547
Query: 567 YSLKVEESIIETTEKLNELTGKINEYSSLN-----DEISLIENKLKNLENDYKNCNYSSQ 621
+ S + L K+N L D ++ + +L +L D +
Sbjct: 548 FYADAALSADVHLDGSPILDAKLNLAPWLKGLKWADNLASAQAQLPSLAADERIVTADGY 607
Query: 622 FL------TKNDESEFLT----KKLELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNL 671
L K D S+ L ++ +LS+ I + + +K + K L+ L +L +L
Sbjct: 608 LLGKGFLIAKQDNSQSLVQLSKEQTQLSEAIAECEQAKAIQQAK-LDELAQQLTQVRDSL 666
Query: 672 EREINLKKELKNIQNDISSKIGIVECYVKWETEKSDFENKLSECKENYEKYMESLAVLKN 731
+ K L +Q D ++K + E + E K + E + LA L
Sbjct: 667 SQG---TKRLHQLQLDKATKSTQLN---NAEAQAKQREAKRGQLAETVARTQAELAELAE 720
Query: 732 YSKTYSVEINNLNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYEN 791
+ + + L E L + ++QQ Q + H+ K +
Sbjct: 721 QLMLLAEQEDELAEALEVSLEQQQQ--------------QSQDAQGDMARHQALKAQIGD 766
Query: 792 ILNEFNDILRTLERISSELKLKNENISYLNEKIQNLSNKKE 832
+ +L+ +++ + + E I ++ L + KE
Sbjct: 767 AERRLASLNASLQSVTTRMAVSTEQIELQRVRVSELVHSKE 807
Score = 52.0 bits (123), Expect = 2e-10
Identities = 179/980 (18%), Positives = 375/980 (38%), Gaps = 169/980 (17%)
Query: 71 ELEFEMMGNTYLVKRKRFQHKTDDKLYVNGKLNAESASEINKKIEEILEIDNSVFSNAIY 130
EL+ +M + + Q L G+L + +E+ K+ ++ E + A Y
Sbjct: 239 ELQSQMASLSEQISSLELQQAAAQSLAQTGELES---TELQLKLSQLAEQEQQAVE-AYY 294
Query: 131 IKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEETLLKLEGELTQ--- 187
+ EIA L Q ++ +E+ + + +Y+ + LE EL+Q
Sbjct: 295 LTGTEIAKLEQQLQSQKQRDAQLHNQLEQLSEQIIQNQAKLAAYQASFQALEAELSQLAP 354
Query: 188 ----EPEILENLE-KLKNEVSESEILKEE--ILKKYENLEKLKLEKN-SEILQMEEKFAE 239
+ E+++ L+ + + VS SE E +L KL+LE + S++ ++ A
Sbjct: 355 QHELQQEMMDELQAQWEMSVSRSEAQSESARVLAAAVAQHKLQLELHRSKLAHQQQLNAH 414
Query: 240 NNQLKENLKDIISEIK---------NINLEIQNFKNSLNLVAEESKNISENEENYKKYLE 290
QL + + ++ + ++N EI + +L E ++ L+
Sbjct: 415 KTQLHQEQQQELASLNAHALEDNSASLNDEITQLEQALAEQVEINQGFESTLAAVTHTLD 474
Query: 291 LEL-KIKELNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKNPDELK-ENLK 348
+ + ++L+ +L ++ +E +E+ L K+ E L D + ++ EN
Sbjct: 475 VARGEFEQLSQRLTSMRARFE------LVEQWLAKQ-----EELSDKPQLWQSIQVENGW 523
Query: 349 ENDEKI----LILDKIKEKIKELEFIEKQIYEIKIH---------KKTVETLFDSVKIYD 395
E ++ L+ + E+ F +H K + +K D
Sbjct: 524 EAAAELALQGLMTLPVGVNANEIGFYADAALSADVHLDGSPILDAKLNLAPWLKGLKWAD 583
Query: 396 D---------SIKTFEELKTKKNSY--ENLLKEKFDLEKKLQNETDEKTKLISELTDFEK 444
+ S+ E + T + L K D + L + E+T+L + + E+
Sbjct: 584 NLASAQAQLPSLAADERIVTADGYLLGKGFLIAKQDNSQSLVQLSKEQTQLSEAIAECEQ 643
Query: 445 I----EEKIN-LENELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHV 499
+ K++ L +L + + LS+ +L+++ L K +K ++ N++A
Sbjct: 644 AKAIQQAKLDELAQQLTQVRDSLSQGTKRLHQLQLDKATKSTQLNNAEA----------- 692
Query: 500 CQSKITEEKKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYG 559
Q+K E K+ +L E + Q L +QL ++ +++++ L
Sbjct: 693 -QAKQREAKRGQLAET----VARTQAELAELAEQLMLLAEQEDELAEAL----------- 736
Query: 560 ELKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYS 619
E S+ + ++ + G + + +L +I E +L +L N S
Sbjct: 737 ------------EVSLEQQQQQSQDAQGDMARHQALKAQIGDAERRLASL-------NAS 777
Query: 620 SQFLTKNDESEFLTKKLELSKIIGDYDSSKIENEKKSLENLKDELKNTIYNL--EREINL 677
Q +T T+++EL ++ ++ S E L +L N ++ + L
Sbjct: 778 LQSVTTR--MAVSTEQIELQRV-------RVSELVHSKETLSAQLANVAAQEGDQQTVQL 828
Query: 678 KKELKNIQNDISSKIGIVECYVKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYS 737
++L + N + G + +++S L+ ++ + L L T
Sbjct: 829 SEQLAQLLNQ---QQGQQQALKSLRSQQSSLTETLNSIGLKQKQELGKLEGLTQSLSTLK 885
Query: 738 VEINNLNEFLNQKIA--EKQQFCEKLLETRTEIEKNIQTVNYNPELHENAKRLYENILNE 795
+ L + ++A +QQ +I ++ + + + ++ + I+
Sbjct: 886 LRREGLKGQADSQLAALSEQQI------VLAQIVDSLPADGHPDKWQRDLDQIRQKIIRL 939
Query: 796 FNDILRTLERISSELKLKNENISYLNEKIQNLSN---------KKEEKKKIEEFKEYLDK 846
L +E E + ++E SYL+ + ++L+N +K +K+ FK D
Sbjct: 940 GAINLAAIE----EFEQQSERKSYLDHQDEDLNNGLATLEEAIRKIDKETRTRFKTTFDA 995
Query: 847 IKREI---FSK--DGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGLP 901
+ ++ F K G + YL L++ + Q S I L
Sbjct: 996 VNEDLGRLFPKVFGGGRAYLALTEDDLLETGVTIMAQPPGKKNSTIHL------------ 1043
Query: 902 VETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTINQ 961
LSGGE+ +L+L I + N +LDE A LD+ + + K + Q
Sbjct: 1044 ---LSGGEKALTALSLVFAIFRL--NPAPFCMLDEVDAPLDDANVERFCRLLKEMSQSVQ 1098
Query: 962 MAIITHHQELEQIADNIVKV 981
I+H++ ++AD ++ V
Sbjct: 1099 FIYISHNKITMEMADQLIGV 1118