Pairwise Alignments

Query, 264 a.a., RlmF-related methyltransferase from Methanococcus maripaludis S2

Subject, 341 a.a., Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) from Pseudomonas fluorescens FW300-N2E2

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 20  EKLKDFVVYKSGKPRIDFKNKEAMKEYNIAILGHVFGL-DMDFHEDALIPTPINRYLFIK 78
           E  K  ++   GK  IDF + EA++ +N A+L   +G+   D   D L P    R  ++ 
Sbjct: 52  ELAKFVIINPYGKESIDFASPEAVRVFNRALLKAFYGIAHWDIPADYLCPPVPGRADYVH 111

Query: 79  NIFD----------EKDDIKDVLEIGTGSGIISILIA-KYFECNVTATDTVSDYLKIAKD 127
            + D           +     VL+IGTG+  +  LI    +  +   ++     +  AK 
Sbjct: 112 FLADLLASHNAGEIPRGAAVKVLDIGTGANCVYPLIGYSDYRWHFLGSEIDPTAIASAKA 171

Query: 128 NISKNNLTSKINLID--SKGKIIFDIPELKNKKFDLIISYPPYYADNSVASKRS 179
            +  N L   I L    ++ +I+  + E   ++FDL +  PP++A    A+K S
Sbjct: 172 IVQSNGLNKAIQLRQQANRKQILLGLLE-DTERFDLTMCNPPFHASLEEATKGS 224