Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 397 a.a., translation elongation factor TU from Pseudomonas stutzeri RCH2

 Score =  143 bits (361), Expect = 9e-39
 Identities = 91/291 (31%), Positives = 157/291 (53%), Gaps = 25/291 (8%)

Query: 5   NINLGIFGHIDHGKTTLSKVLTEIAST---SAH------DKLPESQKRGITIDIGFSAFK 55
           ++N+G  GH+DHGKTTL+  LT + S    SA       D  PE + RGITI+     + 
Sbjct: 12  HVNVGTIGHVDHGKTTLTAALTRVCSEVFGSARVDFDKIDSAPEEKARGITINTAHVEYD 71

Query: 56  LENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPII 115
                   VD PGHAD ++ +++ A  +D A++V  A +GP  QT EH+L+     +P I
Sbjct: 72  SNIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYI 131

Query: 116 VV-ITKSDNAGTEE-IKRTEMIMKSILQS-------TQNLKNSSIIPISAK--TGFGVEE 164
           VV + K+D     E ++  EM ++ +L +       T  +  S+++ ++ +     G   
Sbjct: 132 VVFLNKADMVDDAELLELVEMEVRDLLSTYDFPGDDTPIIIGSALMALNGQDDNEMGTTA 191

Query: 165 LKNLIINTLNN--AEIIRNTESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLP 222
           +K L + TL+    E +R  +  F MP++  F I G GTVVTG + +GIVK+ +E++++ 
Sbjct: 192 VKKL-VETLDTYIPEPVRAIDKPFLMPIEDVFSISGRGTVVTGRVERGIVKIQEEIEIVG 250

Query: 223 INMSTKV--RSIQCFKESVMEAKAGDRVGMAIQGVESKQIYRGCILTSKDT 271
           +  +TK     ++ F++ + E +AG+  G+ ++G +   + RG +L    T
Sbjct: 251 LRDTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLAKPGT 301