Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (346), Expect = 5e-37
 Identities = 87/284 (30%), Positives = 153/284 (53%), Gaps = 24/284 (8%)

Query: 5   NINLGIFGHIDHGKTTLSKVLTEIAST---------SAHDKLPESQKRGITIDIGFSAFK 55
           ++N+G  GH+DHGKTTL+  +  + +          ++ D  PE ++RGITI+     + 
Sbjct: 12  HVNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYD 71

Query: 56  LENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIP-I 114
             N     VD PGHAD ++ +++ A  +D  ++VV A +G   QT EH+L+     IP I
Sbjct: 72  TPNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYI 131

Query: 115 IVVITKSDNAGTEE-IKRTEMIMKSIL-------QSTQNLKNSSIIPISAKTGF--GVEE 164
           IV + K D    EE ++  EM ++ +L            ++ S++  ++ +  +   + E
Sbjct: 132 IVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIVE 191

Query: 165 LKNLIINTLNNAEIIRNTESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPI- 223
           L   +   +   E  R  +  F MP++  F I+G GTVVTG I +GI+KVGDE+ ++ I 
Sbjct: 192 LAEALDTYIPEPE--RAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIK 249

Query: 224 -NMSTKVRSIQCFKESVMEAKAGDRVGMAIQGVESKQIYRGCIL 266
             + T    ++ F++ + E +AG+ VG  ++G + +++ RG +L
Sbjct: 250 ETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVL 293