Pairwise Alignments

Query, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

Subject, 410 a.a., translation initiation factor IF-2 subunit gamma from Methanococcus maripaludis JJ

 Score =  102 bits (254), Expect = 2e-26
 Identities = 112/421 (26%), Positives = 188/421 (44%), Gaps = 70/421 (16%)

Query: 6   INLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFS------------- 52
           +N+G+ GH+DHGKT+L++ LT + +    D   E  KRGI+I +G++             
Sbjct: 9   VNIGMVGHVDHGKTSLTRKLTGVWT----DTHSEELKRGISIRLGYADCEIKKCETCDEP 64

Query: 53  ------------AFKLENYR-ITLVDAPGHADLIRAVVSAADIIDLALIVVDA-KEGPKT 98
                         KL+  R I+ VDAPGH  L+  ++S A ++D A++V+ A +E P+ 
Sbjct: 65  ECYTVGKKCDSCGGKLQTLRKISFVDAPGHETLMATMLSGASLMDGAILVIAASEECPQP 124

Query: 99  QTGEHMLILDHFNI-PIIVVITKSDNAGTEEIKRTEMIMKSILQSTQNLKNSSIIPISAK 157
           QT EH++ LD   +  II+V  K D    E        +K   + T   +N+ IIP+SA 
Sbjct: 125 QTKEHLMALDALGVEKIIIVQNKIDLVSEEAAVENYNQIKEFTKGTV-AENAPIIPVSAH 183

Query: 158 TGFGVEELKNLI---INTLNNAEIIRNTESYFKMPLDHAFP---IKG-AGTVVTGTINKG 210
            G  ++ L   I   I T    E + N + Y     D   P   IK   G V+ G+I +G
Sbjct: 184 HGANLDVLLKAIQDFIPTPERDETV-NPKLYVARSFDVNKPGSEIKDLKGGVIGGSIIQG 242

Query: 211 IVKVGDELKVLP------------INMSTKVRSIQCFKESVMEAKAGDRVGMAIQ---GV 255
            +KVGDEL++ P            + + TK+ S+    + +  A  G  +G+  +    +
Sbjct: 243 ALKVGDELEIKPGIKVTEGNKTHWVPIITKIISLGVGSKKLKTAYPGGLIGVGTELDPNL 302

Query: 256 ESKQIYRGCILTSKDTKLQTVDKIVAKIKISDIFKYNLTPKMKVHLNVGMLIVPAVAVPF 315
                  G +     T  +T++K+  + ++ +           V     ++I P      
Sbjct: 303 TKSDALSGSLAGIPGTLPETLEKMEIEPQLLE---------RVVGSQDELVIEPLKTNEV 353

Query: 316 KKVTFGKSEENVILNEVISGNECYCAFELEEKVLAEVGDRVLITRLDLPPTTLRICGHGL 375
             +  G S     +   +S        +L+  V A+ GDRV I+R     +  R+ G+G+
Sbjct: 354 LMLNVGTS---TTVGVTVSARPDRAEIKLKLPVCADKGDRVAISR--KIGSRWRLIGYGI 408

Query: 376 I 376
           I
Sbjct: 409 I 409